Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP015399_2                                                                                                                 top


Strain : Lachnoclostridium sp. YL32 GCF_001688665 RefSeq :NZ_CP015399 (chromosome circular)
CRISPR id : NZ_CP015399_2
DR consensus (33 bp) : ATTTCAATCCACAAGGCCCTCGCGGGCCTCGACNumber of repetitions :20
Begin Position : 1951646 End Position : 1952958

1951646ATTTCAATCCACAAGGCTCTCGCGGGCCTCGACTCCTGTCGCCATTATGGCCAGGTCTATCGTAAA1951711
1951712ATTTCAATCCACAAGGCCCTCGCGGGCCTCGACAAATGCATTCTCACGATATTTATTGTAATCTGGA1951778
1951779ATTTCAATCCACAAGGCCCTCGCGGGCCTCGACGGGAAAGAGAAGGGTATATCCCTGGCCTGAGATA1951845
1951846ATTTCAATCCACAAGGCCCTCGCGGGCCTCGACCCATAAAGAGCTTATATGGATTGCGATACTTAAA1951912
1951913ATTTCAATCCACAAGGCCCTCGCGGGCCTCGACTAACATTTAACCGATTGGTTGACGGCCTCCCAGA1951979
1951980ATTTCAATCCACAAGGCCCTCGCGGGCCTCGACGGCGGTGTCGTGGCGGTATCGTCTATTGGCGTGAT1952047
1952048ATTTCAATCCACAAGGCCCTCGCGGGCCTCGACGCAACAGCCGGGAACTGTGGAGCCGCAACATCCGG1952115
1952116ATTTCAATCCACAAGGCCCTCGCGGGCCTCGACAATATGCTTAATACCCTTGCATATGATGCCGGAA1952182
1952183ATTTCAATCCACAAGGCCCTCGCGGGCCTCGACTATATCAGAGATTATGGAGGTTTGCAAGATGGAA1952249
1952250ATTTCAATCCACAAGGCCCTCGCGGGCCTCGACTGAAATTTCTGCCAATGAATATAGAAAGCTTATT1952316
1952317ATTTCAATCCACAAGGCCCTCGCGGGCCTCGACGTGTATGGCACAGGTGAATTTTATGTTCCTGACACG1952385
1952386ATTTCAATCCACAAGGCCCTCGCGGGCCTCGACATGGACCTGAGGGACTTCATCCGAAAGTTTAGC1952451
1952452ATTTCAATCCACAAGGCCCTCGCGGGCCTCGACTTTTTGCTCAAAATCATAAGTTGCTTTTTGGGCAA1952519
1952520ATTTCAATCCACAAGGCCCTCGCGGGCCTCGACCTATGGATACCGCATGTTCAGAACCATCCAATGGAAT1952589
1952590ATTTCAATCCACAAGGCCCTCGCGGGCCTCGACGTTTGCGGAGCTGTATTTTTTATACCTATTTTTAG1952657
1952658ATTTCAATCCACAAGGCCCTCGCGGGCCTCGACGTTACCTTGTCTTTTATTGGCTTCTGATTTGCGT1952724
1952725ATTTCAATCCACAAGGCCCTCGCGGGCCTCGACGCATCTAAAGTTGGGCGCACCACATGTGCAAATT1952791
1952792ATTTCAATCCACAAGGCCCTCGCGGGCCTCGACGTATTTAGAGGGAGGACAAGTATATGAACTTATAT1952859
1952860ATTTCAATCCACAAGGCCCTCGCGGGCCTCGACGCTAATGTAGCGATTTTAATTGCTATTGATGCT1952925
1952926ATTTCAATCCACAAGGCCCTCGCGGGCCTCGAC1952958
Left flanking sequence : Till position 1951646 (length bp)
AATGGTATTCTGGAAGCCTATCACGAAATCAGCCAGCTAAAATCAACCACATATCCAGCAGTGGTGGAAA
GGAAAAGCATATGTATATAAAGCATGTTGT
Right flanking sequence : From position 1952958 (length bp)
AGCAAAACTATCCAACAATCCCTCCACATCCCCCTAACTTTTTATGCATTATGTCCTCCCCTCCTTATTT
CAACCTCCTCCATCCATTCACTCAGCCTAT
Print the CRISPR sequence : From position bp To position bp