Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP015403_4                                                                                                                 top


Strain : Burkholderiales bacterium YL45 GCF_001688905 RefSeq :NZ_CP015403 (chromosome circular)
CRISPR id : NZ_CP015403_4
DR consensus (37 bp) : GTTTCAATTGTACAAACTTACATCCTTCAACTGAAACNumber of repetitions :46
Begin Position : 1165991 End Position : 1169268

1165991GTTTCAATTGTACAAACTTACATCCTTCAACTGAAACGGTCTTGGTTTGACGGGTGGCTGCGTGCGATGAT1166061
1166062GTTTCAATTGTACAAACTTACATCCTTCAACTGAAACAGTCAACTGTGGCGGAAAAATGAAGAAGTTCCGT1166132
1166133GTTTCAATTGTACAAACTTACATCCTTCAACTGAAACATGCATTCATCATTTCGCGCCTGCGGAGGAAAAA1166203
1166204GTTTCAATTGTACAAACTTACATCCTTCAACTGAAACAGCGGTGCTATTACTTATCGTTCTGATCTTCTTAGC1166276
1166277GTTTCAATTGTACAAACTTACATCCTTCAACTGAAACGAGAAGAAAAAGTAATAGCACGATTGCCTTTACTAG1166349
1166350GTTTCAATTGTACAAACTTACATCCTTCAACTGAAACTTACGGAAAACTTTGCGGGAACGTCTACGGGTTAA1166421
1166422GTTTCAATTGTACAAACTTACATCCTTCAACTGAAACAAACTGAAGACGAATATCCGAAGGTAAAGATTCAAA1166494
1166495GTTTCAATTGTACAAACTTACATCCTTCAACTGAAACAACCGCCGGAGTTTGCTGACAAAATCGGATTTAA1166565
1166566GTTTCAATTGTACAAACTTACATCCTTCAACTGAAACAAACCACTCATTCCAAATAAGGTTATATGCTCGAA1166637
1166638GTTTCAATTGTACAAACTTACATCCTTCAACTGAAACTGCGGAGAAACATCGTTAGTGTTCGATGTCTGTTG1166709
1166710GTTTCAATTGTACAAACTTACATCCTTCAACTGAAACTCATTACCATGCAATTATTTTCAATTGCGATTTT1166780
1166781GTTTCAATTGTACAAACTTACATCCTTCAACTGAAACTGAGGCAACGTCTTGAACATTGCACTTTCATTAGGC1166853
1166854GTTTCAATTGTACAAACTTACATCCTTCAACTGAAACAAATGAGCAAGAGACGGCCAATAAAAATCGAATCT1166925
1166926GTTTCAATTGTACAAACTTACATCCTTCAACTGAAACGTAAAAATCGAATCTAGAACGTCTAGACCACATACG1166998
1166999GTTTCAATTGTACAAACTTACATCCTTCAACTGAAACGTTGTTGGTTTTGAGGGTGTTAGGTTTAACGTTAG1167070
1167071GTTTCAATTGTACAAACTTACATCCTTCAACTGAAACACTGGTGATGGTCCTGACCCGATTTCGAATTTCAA1167142
1167143GTTTCAATTGTACAAACTTACATCCTTCAACTGAAACTTGCATCAGCAGAACGAGCTAACCGACAGCCAATA1167214
1167215GTTTCAATTGTACAAACTTACATCCTTCAACTGAAACGGCAAAACTTCATCGACATAAAACGGAACTAAATA1167286
1167287GTTTCAATTGTACAAACTTACATCCTTCAACTGAAACTATCTTCCTGCGGCCGTTGGGCAATTCTTGGACACT1167359
1167360GTTTCAATTGTACAAACTTACATCCTTCAACTGAAACGTACTGGTTTAAATAGCGCACTTTCCCTTGCAAATGA1167433
1167434GTTTCAATTGTACAAACTTACATCCTTCAACTGAAACTTTTGGTCCATTCCTAACCGCTGAATACTGTTTG1167504
1167505GTTTCAATTGTACAAACTTACATCCTTCAACTGAAACCTGTGAGGGCCGAATAGTCCACGCTAAGGTATCCGT1167577
1167578GTTTCAATTGTACAAACTTACATCCTTCAACTGAAACACGACAAAAACGCTTCCAGCAAGGATTGATTGAA1167648
1167649GTTTCAATTGTACAAACTTACATCCTTCAACTGAAACATAAACGATGTTAGTCCATCTATCACGCCACGGTAA1167721
1167722GTTTCAATTGTACAAACTTACATCCTTCAACTGAAACCATTCATCAATGTGGATATTTAGACCGCTGACAT1167792
1167793GTTTCAATTGTACAAACTTACATCCTTCAACTGAAACAAAATCGGCTCACGGCCGAGGACATAAAGCAGATGA1167865
1167866GTTTCAATTGTACAAACTTACATCCTTCAACTGAAACAGAAACAGGCTGAACAACAGCGGGAAGCTATGCG1167936
1167937GTTTCAATTGTACAAACTTACATCCTTCAACTGAAACTCAGCAGATACGCAAGCGGATCGCATTCTTTA1168005
1168006GTTTCAATTGTACAAACTTACATCCTTCAACTGAAACAAGCCCATCCCGGCCCAGACAGCGCACCTCTTGTGG1168078
1168079GTTTCAATTGTACAAACTTACATCCTTCAACTGAAACTCATTACCATGCAATTATTTTCAATTGCGATTTT1168149
1168150GTTTCAATTGTACAAACTTACATCCTTCAACTGAAACTGAGGCAACGTCTTGAACATTGCACTTTCATTAGGC1168222
1168223GTTTCAATTGTACAAACTTACATCCTTCAACTGAAACAAATGAGCAAGAGACGGCCAATAAAAATCGAATCT1168294
1168295GTTTCAATTGTACAAACTTACATCCTTCAACTGAAACGTAAAAATCGAATCTAGAACGTCTAGACCACATACG1168367
1168368GTTTCAATTGTACAAACTTACATCCTTCAACTGAAACGTTGTTGGTTTTGAGGGTGTTAGGTTTAACGTTAG1168439
1168440GTTTCAATTGTACAAACTTACATCCTTCAACTGAAACACTGGTGATGGTCCTGACCCGATTTCGAATTTCAA1168511
1168512GTTTCAATTGTACAAACTTACATCCTTCAACTGAAACTTGCATCAGCAGAACGAGCTAACCGACAGCCAATA1168583
1168584GTTTCAATTGTACAAACTTACATCCTTCAACTGAAACTATCTTCCTGCGGCCGTTGGGCAATTCTTGGACACT1168656
1168657GTTTCAATTGTACAAACTTACATCCTTCAACTGAAACGCTGAGCGGCTTGTGCTCTGGCCATGAGATTTTT1168727
1168728GTTTCAATTGTACAAACTTACATCCTTCAACTGAAACCTGTGAGGGCCGAATAGTCCACGCTAAGGTATCCGT1168800
1168801GTTTCAATTGTACAAACTTACATCCTTCAACTGAAACACGACAAAAACGCTTCCAGCAAGGATTGATTGAA1168871
1168872GTTTCAATTGTACAAACTTACATCCTTCAACTGAAACATAAACGATGTTAGTCCATCTATCACGCCACGGTAA1168944
1168945GTTTCAATTGTACAAACTTACATCCTTCAACTGAAACCATTCATCAATGTGGATATTTAGACCGCTGACAT1169015
1169016GTTTCAATTGTACAAACTTACATCCTTCAACTGAAACAAAATCGGCTCACGGCCGAGGACATAAAGCAGATGA1169088
1169089GTTTCAATTGTACAAACTTACATCCTTCAACTGAAACAGAAACAGGCTGAACAACAGCGGGAAGCTATGCG1169159
1169160GTTTCAATTGTACAAACTTACATCCTTCAACTGAAACGGCTTAATAGTGATCGGGGTGTTCTTTTCACCCTT1169231
1169232GTTTCAATTGTACAAACTTACATCCTTCAACTGAAAC1169268
Left flanking sequence : Till position 1165991 (length bp)
TTTTCGAAAAATTCGGCACTTTTTGTGCAGTTTGAAGTGTTTCGAAAAAATCCTCAGCTAACACAAAATA
AAATTGTTAGATTTCATAGCATTAGCTGAG
Right flanking sequence : From position 1169268 (length bp)
TTGGATAGCCTGAATGCGCAGACTTGTCGCCTATCCATAGGTTGTCATAATACTTTCCCGAGAGAATTTA
AGAGGGCTAAATAAATGGGAAAAGGGGGTT
Print the CRISPR sequence : From position bp To position bp