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CRISPRs details
NZ_CP015575_1
Flanking alignement tool
Page manual
  
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NZ_CP015575_1                                                                                                                 
top
Strain :
Campylobacter hyointestinalis subsp. hyointestinalis LMG 9260 GCF_001643955
RefSeq :
NZ_CP015575 (chromosome circular)
CRISPR id :
NZ_CP015575_1
DR consensus (30 bp) :
GTTTCAAATCCTAAAAGGATAAATTTATAC
Number of repetitions :
114
Begin Position :
1156406
End Position :
1163811
1156406
GTTTCAAATCCTAAAAGGATAAATTTATAC
TTATCTGTCCGCTATTCTTGTCCGTTTTAAATTTA
1156470
1156471
GTTTCAAATCCTAAAAGGATAAATTTATAC
CTTTCAACTACTTTGATTAAACCTTGAACATTTGT
1156535
1156536
GTTTCAAATCCTAAAAGGATAAATTTATAC
GTTAATGTTGTGCTTGGTTTTTAACTGCTCTTTGTG
1156601
1156602
GTTTCAAATCCTAAAAGGATAAATTTATAC
AGTTGTTATTTGATTTGTCATTTTTTATCCTTTTTT
1156667
1156668
GTTTCAAATCCTAAAAGGATAAATTTATAC
TTAAAATTTTAGCTCTCATAGCGTTATGATTTTTTGC
1156734
1156735
GTTTCAAATCCTAAAAGGATAAATTTATAC
TATCCTCCATCTCCTCTTTTGTTTTTAATCCAAATT
1156800
1156801
GTTTCAAATCCTAAAAGGATAAATTTATAC
TATCAAAAATGAGCAGGATTGCACAAAAAGAAATCA
1156866
1156867
GTTTCAAATCCTAAAAGGATAAATTTATAC
AATGATAATTTTGATTATGAAATTATCGAAGTAGAGG
1156933
1156934
GTTTCAAATCCTAAAAGGATAAATTTATAC
GTTAATGTTGTGCTTGGTTTTTAACTGCTCTTTGTG
1156999
1157000
GTTTCAAATCCTAAAAGGATAAATTTATAC
GGTTGCTGAAAACTTGACCACCTGCTTAAATAAGAGCG
1157067
1157068
GTTTCAAATCCTAAAAGGATAAATTTATAC
CGCACCGAAAAAATTAAATCAATATCAAAAAGATAG
1157133
1157134
GTTTCAAATCCTAAAAGGATAAATTTATAC
AATATACCTTTATAGCGCTCTCTCCGCCTATTTGA
1157198
1157199
GTTTCAAATCCTAAAAGGATAAATTTATAC
AGATATCTATGCAAACCATAGGGGGATTTTAAC
1157261
1157262
GTTTCAAATCCTAAAAGGATAAATTTATAC
AGCAAGAGATAGATGAAGCGTGGGCGAGGCTTAG
1157325
1157326
GTTTCAAATCCTAAAAGGATAAATTTATAC
CAAAAATACATAAAGCCCATAGGGTAAGCATAATAAAA
1157393
1157394
GTTTCAAATCCTAAAAGGATAAATTTATAC
ACAGAGGTAAAAAGAGACGACGAGGCTATTCAAAAGC
1157460
1157461
GTTTCAAATCCTAAAAGGATAAATTTATAC
CAAAGATAAACAAAACCAAATCTACGCTTATGATGA
1157526
1157527
GTTTCAAATCCTAAAAGGATAAATTTATAC
GGGCTAGTATATACTTTGGCTTTATATCGAAAAATATCG
1157595
1157596
GTTTCAAATCCTAAAAGGATAAATTTATAC
CGGCAAACAAAAATGCATAGTAGCCTACGACTCTA
1157660
1157661
GTTTCAAATCCTAAAAGGATAAATTTATAC
TTATTACACTTTCAAGCTCATCAGCAAGGTTAA
1157723
1157724
GTTTCAAATCCTAAAAGGATAAATTTATAC
TATATGATGCTCTTTTTATTTGCACCACTCTTTAC
1157788
1157789
GTTTCAAATCCTAAAAGGATAAATTTATAC
TGAATATACCAAAGGGCTTTCAAACAAACGGGGC
1157852
1157853
GTTTCAAATCCTAAAAGGATAAATTTATAC
CATTTTTTACCCTAAGATATTTTTTCGCAAAACTCTA
1157919
1157920
GTTTCAAATCCTAAAAGGATAAATTTATAC
ATCAATTTTTCTAGGGAAGAGGTAGAGCTATTCGA
1157984
1157985
GTTTCAAATCCTAAAAGGATAAATTTATAC
TACACCTGTTATTGCTGAGCTTCCTATAATGGACTT
1158050
1158051
GTTTCAAATCCTAAAAGGATAAATTTATAC
GCTAGCTTATTTTCTACAAAGACGCTCATTTTGG
1158114
1158115
GTTTCAAATCCTAAAAGGATAAATTTATAC
AATAAAGCGTTACTTTTCTAGCATATCAATCAAAAA
1158180
1158181
GTTTCAAATCCTAAAAGGATAAATTTATAC
TTTAGAATGCGTCTGTGCAGAGAATAGCATAACGC
1158245
1158246
GTTTCAAATCCTAAAAGGATAAATTTATAC
CAAGCCTTTTATTGTATATTTCATATTTTTCTTCGGA
1158312
1158313
GTTTCAAATCCTAAAAGGATAAATTTATAC
GTTATGCTTGAAACAATACCCGGAAGCCAATTTTG
1158377
1158378
GTTTCAAATCCTAAAAGGATAAATTTATAC
AAAGCCAAACCACGTTTTTAAGGCTATTTAAACA
1158441
1158442
GTTTCAAATCCTAAAAGGATAAATTTATAC
GAATTATTCGGTTCTTTTGGTTTTGAAGCAATAGAGC
1158508
1158509
GTTTCAAATCCTAAAAGGATAAATTTATAC
TTAGGGTATTTGTTAGCTCGTCTGTTTTAGTGTT
1158572
1158573
GTTTCAAATCCTAAAAGGATAAATTTATAC
CAAACCAAAGGTCACTCCACTACCAACAAAAACACC
1158638
1158639
GTTTCAAATCCTAAAAGGATAAATTTATAC
TCAACGCCGACAAAAAACATAGGGTCGCCATACTTA
1158704
1158705
GTTTCAAATCCTAAAAGGATAAATTTATAC
TCATACAAAAAACAACTCATCTAAATTTAAAAAGAA
1158770
1158771
GTTTCAAATCCTAAAAGGATAAATTTATAC
TCAAAAAAGGAATGAGCGTAGCGGAATTTTTAAATT
1158836
1158837
GTTTCAAATCCTAAAAGGATAAATTTATAC
TGCCTGTTATATCATTAGCAAAACTTATATTTGA
1158900
1158901
GTTTCAAATCCTAAAAGGATAAATTTATAC
GCTCCCTCTTTATTTTTTTCATCTCTTTTTTTAGC
1158965
1158966
GTTTCAAATCCTAAAAGGATAAATTTATAC
GCGTTTAGGATTTACAAGAGGTTGTGCAAATTACG
1159030
1159031
GTTTCAAATCCTAAAAGGATAAATTTATAC
ACTGGGTGCTTAGTAGATATGACCTGAATGAGTT
1159094
1159095
GTTTCAAATCCTAAAAGGATAAATTTATAC
TAATTCCAAAATAGAGAGCCTATATCCACAAGCTAG
1159160
1159161
GTTTCAAATCCTAAAAGGATAAATTTATAC
TACGAGAACGAGGAGCTATTAGTAGGAGAGATGA
1159224
1159225
GTTTCAAATCCTAAAAGGATAAATTTATAC
GACCCAGCCAAATAAACAACGATAGAACTCTCAGA
1159289
1159290
GTTTCAAATCCTAAAAGGATAAATTTATAC
AAAGTTTCAATGCTCATTTTTAATCCTTTTTTGATAA
1159356
1159357
GTTTCAAATCCTAAAAGGATAAATTTATAC
TTAATTGATGATTTTTATTTTCTTTGTGAAATCT
1159420
1159421
GTTTCAAATCCTAAAAGGATAAATTTATAC
TTTTGCTGATTTGTTAGACTTCCCCTTGAACTTC
1159484
1159485
GTTTCAAATCCTAAAAGGATAAATTTATAC
CTTTTGGTTATGGAGAAAAAGAGGGAAAAGAGGTT
1159549
1159550
GTTTCAAATCCTAAAAGGATAAATTTATAC
ATGGAAATGTTAGATAATAAAAACGTCACAACAAA
1159614
1159615
GTTTCAAATCCTAAAAGGATAAATTTATAC
ATTTCTATTTTGTAGGTCATATGTGATTTTTGATA
1159679
1159680
GTTTCAAATCCTAAAAGGATAAATTTATAC
GCAAGATAGATAGCTTAAATGATGAGCTTAAAGCGTA
1159746
1159747
GTTTCAAATCCTAAAAGGATAAATTTATAC
AGCGGTTGGGAGCATTTTCAATTTTCTAGCTTTGA
1159811
1159812
GTTTCAAATCCTAAAAGGATAAATTTATAC
GAAATCATCAAAACAACGCAAGATGAGTTCAAGAT
1159876
1159877
GTTTCAAATCCTAAAAGGATAAATTTATAC
ATAGCACTGTCTAAGCCGTTCATTTTAGATTTTAAG
1159942
1159943
GTTTCAAATCCTAAAAGGATAAATTTATAC
TTATTTCAAATTTAGCCGATTTTTATTTGATAGTG
1160007
1160008
GTTTCAAATCCTAAAAGGATAAATTTATAC
GATACTGTCTTGAATTTCACGTGTGCAAAGTATCCT
1160073
1160074
GTTTCAAATCCTAAAAGGATAAATTTATAC
TTTACTTCATAAATGCTACTTAAGCATTCGTTAA
1160137
1160138
GTTTCAAATCCTAAAAGGATAAATTTATAC
ATTCGGCGGATACCAATACAGAAGTTGCGAGGACA
1160202
1160203
GTTTCAAATCCTAAAAGGATAAATTTATAC
AAAAATCACGCTAGGCTTAACTTCAGCGTTATAG
1160266
1160267
GTTTCAAATCCTAAAAGGATAAATTTATAC
CAATGGCGATAGAAATGCGATAGAAACAAGAGCCAA
1160332
1160333
GTTTCAAATCCTAAAAGGATAAATTTATAC
CTAAATAGACCAAAAGAGCCAAGCCTTGATGAGC
1160396
1160397
GTTTCAAATCCTAAAAGGATAAATTTATAC
TCACAAAAATATTTTAAGAGAAAAGACACTCAAG
1160460
1160461
GTTTCAAATCCTAAAAGGATAAATTTATAC
TTAGCAGGTATGCCTATCATTCCTTTATCGATGAT
1160525
1160526
GTTTCAAATCCTAAAAGGATAAATTTATAC
GATGAGTTTCTTATATCGTTGTTATCAAAAAAAT
1160589
1160590
GTTTCAAATCCTAAAAGGATAAATTTATAC
GTCAGCTCCAACCATATGCAAAATATTACCATTTA
1160654
1160655
GTTTCAAATCCTAAAAGGATAAATTTATAC
CTTGCGCGACTAGAAATGAAAAAATCACCAAAACC
1160719
1160720
GTTTCAAATCCTAAAAGGATAAATTTATAC
GTTGTGTATCAGTTTTTAAATTATTTTTCAAAGG
1160783
1160784
GTTTCAAATCCTAAAAGGATAAATTTATAC
TTTAAAAAAAAGCGTTTGTTATATTTGCTTGAAA
1160847
1160848
GTTTCAAATCCTAAAAGGATAAATTTATAC
ATGATCATATACGCCAAAAATCGCTAACTGGCTA
1160911
1160912
GTTTCAAATCCTAAAAGGATAAATTTATAC
CTATCGTTACTTCATCTCTTTTTACTTCTATGTCAA
1160977
1160978
GTTTCAAATCCTAAAAGGATAAATTTATAC
ACAAAAAAAGCTTTTAGACGAAAAGATAGAGGAGC
1161042
1161043
GTTTCAAATCCTAAAAGGATAAATTTATAC
TAATACAATTGGCGAGTTTTGGGATGATAGCGTTCG
1161108
1161109
GTTTCAAATCCTAAAAGGATAAATTTATAC
CTCAGACGGTGTTTCAGTTTCTGCAGGTGGGGAAGG
1161174
1161175
GTTTCAAATCCTAAAAGGATAAATTTATAC
ATACGCCAACTAAAGCCAAAGCTAGGGCTAAAAAG
1161239
1161240
GTTTCAAATCCTAAAAGGATAAATTTATAC
GGTCATTTAATAATCCATATGTTTTATTATTACCATTAT
1161308
1161309
GTTTCAAATCCTAAAAGGATAAATTTATAC
CATTTCATAGTCTTTTTTTACATTTTCCCAAAAA
1161372
1161373
GTTTCAAATCCTAAAAGGATAAATTTATAC
TCAAGCCAAAGTATATCAAGGGCGAACCTCTTCA
1161436
1161437
GTTTCAAATCCTAAAAGGATAAATTTATAC
TCCTCTTAAAATATTTTTCTGTTTTGGTTTGTGGA
1161501
1161502
GTTTCAAATCCTAAAAGGATAAATTTATAC
TAGCTTTGATATAATATCTATCGCCGATTATCAC
1161565
1161566
GTTTCAAATCCTAAAAGGATAAATTTATAC
TCTATCATTTTTTAGCTCTCTATCAAACACAAAATA
1161631
1161632
GTTTCAAATCCTAAAAGGATAAATTTATAC
ATTTGTCAGAGGCTACAAGCTTAAGCGACGTAGCGAG
1161698
1161699
GTTTCAAATCCTAAAAGGATAAATTTATAC
TAGGGTCATTCGCAAAACCCCAGTCTGCCCCAAAA
1161763
1161764
GTTTCAAATCCTAAAAGGATAAATTTATAC
TTTGGGAGGGCGAACTTAGAAAAAACACAAACGAGC
1161829
1161830
GTTTCAAATCCTAAAAGGATAAATTTATAC
CGAATTTAACTTGCGTTTTATCCGCTTTGCCATTAAA
1161896
1161897
GTTTCAAATCCTAAAAGGATAAATTTATAC
AGTTTGATAGACCTAAAATAGTGCAAATTCAAA
1161959
1161960
GTTTCAAATCCTAAAAGGATAAATTTATAC
TTTAGCTAAAACTTCGCGGTTGCTTGGTGAAAATA
1162024
1162025
GTTTCAAATCCTAAAAGGATAAATTTATAC
TAAATCTTGGGGCTCAATCTACATTCGGAGCAGAAG
1162090
1162091
GTTTCAAATCCTAAAAGGATAAATTTATAC
CAAAGCCTACTTAAAGCTAAATATTGCTGTCCG
1162153
1162154
GTTTCAAATCCTAAAAGGATAAATTTATAC
GCTGTCTACCGTTTCAGACTTTGTCTCTTGTTCTT
1162218
1162219
GTTTCAAATCCTAAAAGGATAAATTTATAC
ATTATGAAGCATTCACAAAAACTGACCTTCGCTA
1162282
1162283
GTTTCAAATCCTAAAAGGATAAATTTATAC
CTTCTACCAAAAAGAGCCTTCAAAGATTGAAGTGG
1162347
1162348
GTTTCAAATCCTAAAAGGATAAATTTATAC
TTAATCCAAATTTAACTTCAGAGAAAAACTCAGATA
1162413
1162414
GTTTCAAATCCTAAAAGGATAAATTTATAC
AAGCGGATTAATTAAAGGGAGGTTAAGAACCATAA
1162478
1162479
GTTTCAAATCCTAAAAGGATAAATTTATAC
AATTGCTTTGTGTGGCGTGTAGCCTTTTGCAGTGGC
1162544
1162545
GTTTCAAATCCTAAAAGGATAAATTTATAC
ATATCTTCTATGGTATAGAAAAACATTTTACTATCG
1162610
1162611
GTTTCAAATCCTAAAAGGATAAATTTATAC
TTGGTATAGCCGACAGTTGTATCGGTTTCCTTGA
1162674
1162675
GTTTCAAATCCTAAAAGGATAAATTTATAC
TCTCTTGAAAATTTGTTTTATTTTTTTCATCATTTA
1162740
1162741
GTTTCAAATCCTAAAAGGATAAATTTATAC
AGCTTTAATATTCAAATAGAAAATATCACGTATGAAA
1162807
1162808
GTTTCAAATCCTAAAAGGATAAATTTATAC
TTTTGTTTTAGCCAAATAGCGAAGTCTTGAACTTTTG
1162874
1162875
GTTTCAAATCCTAAAAGGATAAATTTATAC
AGCCGACCAAAAAATAGAAGTTCCAAAAGAGTATG
1162939
1162940
GTTTCAAATCCTAAAAGGATAAATTTATAC
GTATTTAAAGGGACGTAGGCATAAAGCAAAGCTA
1163003
1163004
GTTTCAAATCCTAAAAGGATAAATTTATAC
CGATATAATCTTTGTTATATCTTCTTATAATCTCAA
1163069
1163070
GTTTCAAATCCTAAAAGGATAAATTTATAC
CGTCAGCTGTTTCACTAGCGTTAAACTTCGTTTTTC
1163135
1163136
GTTTCAAATCCTAAAAGGATAAATTTATAC
CTGGGCGTGAGTTTGGCTTTGCGCCATATGGCAA
1163199
1163200
GTTTCAAATCCTAAAAGGATAAATTTATAC
TCGCTTTGTAGTCTTTGTAGGCTTTGTAACCTTTG
1163264
1163265
GTTTCAAATCCTAAAAGGATAAATTTATAC
TTTTTTATCCTTATTTGATTTGGTTTTATTTATT
1163328
1163329
GTTTCAAATCCTAAAAGGATAAATTTATAC
ACCGATAGCGTATATCAAGAGGTAGAACAAGAGTA
1163393
1163394
GTTTCAAATCCTAAAAGGATAAATTTATAC
TTGATTACCACCTGCAATATTGCCACTATTGTTTA
1163458
1163459
GTTTCAAATCCTAAAAGGATAAATTTATAC
TTTCTACAAGTTCTTTGCCTTTACTTGTTAGCTC
1163522
1163523
GTTTCAAATCCTAAAAGGATAAATTTATAC
TTAAAAATTGAGTTGAAAAGCTAGGCTTATCTCGTA
1163588
1163589
GTTTCAAATCCTAAAAGGATAAATTTATAC
CCAACGCTTGTCAAGCCGTCAATTATCAAAGGTC
1163652
1163653
GTTTCAAATCCTAAAAGGATAAATTTATAC
GGTAGGTAAATTTATAAATCCGCAAACTCACGGAC
1163717
1163718
GTTTCAAATCCTAAAAGGATAAATTTATAC
TTAGCTGTGCCTCTACTTCTTTACGCCCTTGCTG
1163781
1163782
GTTTCAAATCCTAAAAGGATAAATTTATAC
1163811
Left flanking sequence : Till position 1156406 (length
bp)
CTTTTAATAAAATTAACAAAACAACAACCACCCTAAGCGATGCCCTAGATAAAAACATAAAAACAGCACT
AACAGCGATAAAAAATGCAAATCACAAAAA
Right flanking sequence : From position 1163811 (length
bp)
AGCAACAAAAACAGCTAAATTTAGTACTTTGTACCAAGTTTTACTATATTTATTTTACTAAAAAATGGCT
TAATATAGTATTTATAAAATCATCAAATAA
Print the CRISPR sequence : From position
bp To position
bp