Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP015702_2                                                                                                                 top


Strain : Clostridium botulinum GCF_001951135 RefSeq :NZ_CP015702 (plasmid pNPD8_2 line)
CRISPR id : NZ_CP015702_2
DR consensus (29 bp) : GTTTAACTTCTACATTAGATGTATTTAAANumber of repetitions :5
Begin Position : 33107 End Position : 33421

33107GTTTAACTTGTACATTAGATGTATTTAAACCATAGGGGTACTAATGAAAGTATTAAAGAAAAA33169
33170ACTTAACTGCTACATTAGATGTATTTAAACCATAACTGCCATTATAAAACTAGCTACAACACTAAC33235
33236GTTTAACTTCTACATTAGATGTATTTAAACTACAAAAAGCACAAAAAGATATAAGATTAAACAAACGGAGGTTTTACCTAAAATAAGATAC33326
33327GTTTAACTGCTACATTAGATGTATTTAAACGAATTATAAGGTTTGCACAACTATGTACTATTATTT33392
33393GGTTAACTTCTACATTGGATGTATTTAAA33421
Left flanking sequence : Till position 33107 (length bp)
GAAAATAAAAAAGATATAAGATTTTTCATAATTTAACTTCTATTGGATATATTTAAGCAAACAAACGTAG
GTTTTACGTTTTACAAATGCATAAATATAA
Right flanking sequence : From position 33421 (length bp)
AAGTATAAGTTTAAATATAAAGAGAGAAAGAGAAGGTGTAAAAATGAAGAAAAAAGCATAGATAGAGCTT
GCTATGTTAGCATTTTACCTGATTTATATA
Print the CRISPR sequence : From position bp To position bp