Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP015736_1                                                                                                                 top


Strain : Shinella sp. HZN7 GCF_001652565 RefSeq :NZ_CP015736 (chromosome circular)
CRISPR id : NZ_CP015736_1
DR consensus (36 bp) : AGCCTAGCAGTTCAGAAATCGCAGGCCAACCGCAACNumber of repetitions :16
Begin Position : 972268 End Position : 973293

972268AGCCTAGCAGTTCAGAAATCGCAGGCCAACCGCAACCAACTCGCCTTCGAGCGCCTGGATACGGCG972333
972334AGCCTAGCAGTTCAGAAATCGCAGGCCAACCGCAACTTCGGATGCCGCCCCGTGGCGGGGCGGTCA972399
972400AGCCTAGCAGTTCAGAAATCGCAGGCCAACCGCAACTCCCCGCCACAAGCACGGACACGGGCGGGG972465
972466AGCCTAGCAGTTCAGAAATCGCAGGCCAACCGCAACATGCTGGCGCGTGCGTATTCGAGCAGCGGG972531
972532AGCCTAGCAGTTCAGAAATCGCAGGCCAACCGCAACGGTGGAAAGGCTGAACATGCTGTCTCCTAA972597
972598AGCCTAGCAGTTCAGAAATCGCAGGCCAACCGCAACACTTCGCTCTGAAGGTTCGCCTGAGACTGC972663
972664AGCCTAGCAGTTCAGAAATCGCAGGCCAACCGCAACAAGGACGGGGGCCTCCTCGGCGGCGAAATC972729
972730AGCCTAGCAGTTCAGAAATCGCAGGCCAACCGCAACCGGGCGAGCGAGCAATCGCTGCGGCCCTCG972795
972796AGCCTAGCAGTTCAGAAATCGCAGGCCAACCGCAACGGTTCCACCATCGCCAATAGGCTGGCCCTT972861
972862AGCCTAGCAGTTCAGAAATCGCAGGCCAACCGCAACTGTCAGATCGAGGAAAAGGGCTTTGTTTAC972927
972928AGCCTAGCAGTTCAGAAATCGCAGGCCAACCGCAACAAGGTGAACGTCACTGGGACGCGCAACTGG972993
972994AGCCTAGCAGTTCAGAAATCGCAGGCCAACCGCAACCGGGTTTTCATTGATAGTCTCTCCTGGTGC973059
973060AGCCTAGCAGTTCAGAAATCGCAGGCCAACCGCAACAACAATGAGGGCGCGGCCTTCTGGGAGCAC973125
973126AGCCTAGCAGTTCAGAAATCGCAGGCCAACCGCAACAAAATGAGTACCGTCGAGTTCTGCCAAAAT973191
973192AGCCTAGCAGTTCAGAAATCGCAGGCCAACCGCAACGACGATCTCGCGCAGGGGCGTGTCGGCCGG973257
973258AGCCAAGCAGTTCAGAAATCGCAGGCCAACCGCAAC973293
Left flanking sequence : Till position 972268 (length bp)
AAATCCCGAGCAGATTGCTCTATTCTAGTGTTCGCGGACCATTTCATGGCGCGATAAAGCCCCAAAACCA
CTGTCGAAACAGGGGCTTGGGGCAATATCG
Right flanking sequence : From position 973293 (length bp)
CTGCGCCAATCCGTGAATCTCTCGGCGCTGAGCCTAGGCTCAGGACTCATTGATTAGATCCAGAAGATGT
TTGTTGCAGCGATGCATATGGCTGAAAAGA
Print the CRISPR sequence : From position bp To position bp