Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP015970_5                                                                                                                 top


Strain : Acidipropionibacterium acidipropionici GCF_001855335 RefSeq :NZ_CP015970 (chromosome circular)
CRISPR id : NZ_CP015970_5
DR consensus (36 bp) : ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGCNumber of repetitions :20
Begin Position : 1998949 End Position : 2000362

1998949ATCGCTCCCCTTTCCAGGGGAGCCCTTTGTTGAGGCAGCACGCCGTCTCAGCCGCACGCCTACCGCCGCTC1999019
1999020ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGCACCCAGCTCTCCAGCGAGTCGACCCGTGCGCTCGCCCT1999093
1999094ATCGCTCCCATTTCCAGGGGAGCCCTTCGTTGAGGCAAGAAGAGCGAGACGTTCCGGCGGATCGTCAACGCGG1999166
1999167ATCGCTTTCCTTTCCAGGGGAGCCCTTCGTTGAGGCTCGCATGGAATGAAATGCGCGGGATGAAACCGGAGTT1999239
1999240ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGCGACGTGGCCCGCGCCGCCGTGCTGCGCTGGATCACCC1999312
1999313ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGCCCCGGGCGGCCAGGACAGAACCCCGCCGCCGTCAC1999383
1999384ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGCTAGTTGGTGGACCATTCCCACCGCTTCGAATCGTCCT1999456
1999457ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGCGGCGAATGCACCACACAGACAGGGAGGAATCGCATGGCA1999531
1999532ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGCCAGATCGTTGCACCTAGCGCATCAGGACGCGCGCT1999602
1999603ATCGCTCCTCTTTCCAGGGGAGCCCTTCGTTGAGGCATGAGCTTGGGCTGCCCGTTGGACCAGAAGGCGGGTT1999675
1999676ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGCCAGATCGTTGCACCTAGCGCATCAGGACGCGCGCT1999746
1999747ATCGCTCCTCTTTCCAGGGGAGCCCTTCGTTGAGGCATGAGCTTGGGCTGCCCGTTGGACCAGAAGGCGGGTT1999819
1999820ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGCGGATGGGTCGCCAGCGTCCGCGCCACCCTCCCCAG1999890
1999891ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGCGTGGGATTCGGATATCCCCCCGCATCACACCCGGC1999961
1999962ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGCCGGCGGTGGAATGACCTAGGCCGATCAGCTTGGAC2000032
2000033ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGCGACCAGCGCAGGACGGGCGAGCCGGTGCCGACAG2000102
2000103ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGCGCGTCGAGCTGCTCGGTGCGGGCGATGACGGTGGCCC2000175
2000176ATCGCTCCCCCTTCCAGGGGAGCCCTTCGTTGAGGCTCCCGCCGGAACATCCCGCCCCTCAGGGACTTGGTGCG2000249
2000250ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGCCCGAGTGCCTTCTTGGCCTGGGCTACCTGTGCCTTCTCGAG2000326
2000327ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC2000362
Left flanking sequence : Till position 1998949 (length bp)
GTCAGGTGCACGGGTTCAGTCTTGGGACTCGGCATGACCAGAGTCTACCAAGACTAACCAGAAACTTCCG
ACTCAGGACACTAGGCCGATCAGCTTGGAC
Right flanking sequence : From position 2000362 (length bp)
ACGGCTGCTGCGGCCGTGCTGGCCGCACTTGGCGCATCGCGGCTCTTCAGGATCCAGGGTGTAGTCGGGG
TCTGAATCCTCCGGTCTCCAGGAGGGATCT
Print the CRISPR sequence : From position bp To position bp