Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP015998_1                                                                                                                 top


Strain : Enterococcus faecalis GCF_001931845 RefSeq :NZ_CP015998 (chromosome circular)
CRISPR id : NZ_CP015998_1
DR consensus (36 bp) : GTTTTGGTACCATTCTAAACAACATGACTCTAAAACNumber of repetitions :6
Begin Position : 933898 End Position : 934263

933898GTGATAGTTTGTTTTTTAACAACATGGCTCTAAAACAAATTTTTTGAACTTAATGCAATTTCTTGA933963
933964GTTTTGGTACCATTCTAAACAACATGACTCTAAAACMAARCKTTTGASSRSKYTKKWSTSMWMCSA934029
934030GTTTTGGTACCATTCTAAACAACATGACTCTAAAACSMAASTTKYGBYRAYTTYYMKHYWWCTNHB934095
934096GTTTTGGTACCATTCTAAACAACATGACTCTAAAACRYMMYTYKYSYWKYMYTWYCWWMKWYTGCW934161
934162GTTTTGGTACCATTCTAAACAACATGACTCTAAAACKRMKMSMTMYYMWSATAYGTWSASRGKGCW934227
934228GTTTTGGTACCATTCTAAACAACATGACTCTAAAAC934263
Left flanking sequence : Till position 933898 (length bp)
ACATTTTGACTTATCACTTGATTAGTTTTCGAAAATCGAAGCAGCTCGTCTTTGATGATAAAAATTCTAA
TCTTGTGATGAAAATTACGGATTGCTTGTG
Right flanking sequence : From position 934263 (length bp)
CTCGGAGAATTATTTTTTCTCCATGATTCCGTATTCGCATCACTTATCCATAGCTAGATTTCAGTTTAGA
AGGTCTGATTTTTTTCTTCACGTTTATTAT
Print the CRISPR sequence : From position bp To position bp