Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP016162_2                                                                                                                 top


Strain : Pseudomonas alcaliphila JAB1 GCF_001941865 RefSeq :NZ_CP016162 (chromosome circular)
CRISPR id : NZ_CP016162_2
DR consensus (25 bp) : TCATCCCCGCTGGCGCGGGGAACACNumber of repetitions :8
Begin Position : 4287895 End Position : 4288346

4287895TCATCCCCGCTAAAGCGGGGAACACCAGGCAGCGATGTACTCCAGCGCCATCTCCTGCGGT4287955
4287956TCATCCCCACTGGCGCGGGGAACACGCGCACTACCTGAAATGCGATCTGGCCAACTTCGGC4288016
4288017TCATCCCCGCTGGCGCGGGGAACACACCCGTTACATGGACACCCTGATCGAGGCCGGCGGT4288077
4288078TCATCCCCGCTGGCGCGGGGAACACTATCATCCCTACATGAAGGCTCTATTTCGGGGCGGT4288138
4288139TCATCCCCGCTGGCGCGGGGAACACACCGGTAGCGAGTAATCGAGATTTAGAGCCAGCGGT4288199
4288200TCATCCCCGCTGGCGCGGGGAACACGACCTGGTCAACCAGCGTCGGCACCTGTGCGACGGT4288260
4288261TCATCCCCGCTGGCGCGGGGAACACGTTACCGTTCGGCAGGTAGCGCGTTTCCGGGTCGGT4288321
4288322TCATCCCCGCTGGCGCGGGGAACAC4288346
Left flanking sequence : Till position 4287895 (length bp)
CCCTTTTCATCCGCGTCACAGACGTGCACGCAGAACCATCGGCGGCAAGATTACTCGCCTGCCCGGCTAA
AAAACAGCGTGCCGGGTACCCCCTCGAAGC
Right flanking sequence : From position 4288346 (length bp)
ACTTAGCCTAACCAATTGTTCTCAAAGGAGAAAATCAGCCGCTAAAAATCTACCAACTTCTCCTTGTTAA
AGATCGCCCCTGTATCAAAGCAGATTCGGC
Print the CRISPR sequence : From position bp To position bp