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CRISPRs details
NZ_CP016313_1
Flanking alignement tool
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NZ_CP016313_1                                                                                                                 
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Strain :
Thermus brockianus GCF_001880325
RefSeq :
NZ_CP016313 (plasmid pTB1 circula)
CRISPR id :
NZ_CP016313_1
DR consensus (36 bp) :
GTATCAATCCCCTTACGGGGAAGCATCTCTTGCAAC
Number of repetitions :
8
Begin Position :
32232
End Position :
32792
32232
AACGCAATCCCCTTACGGGGAAGCATCTCTTGCAAC
ATGGTGGTTGGCAAAAAGACATATCAGGGTTCTATAGCC
32306
32307
GTATCAATCCCCTTACGGGGAAGCATCTCTTGCAAC
CGGTTTTGGCGGTTAGGCGTTCTAGTTGGGAAGAGCT
32379
32380
GTATCAATCCCCTTACGGGGAAGCATCTCTTGCAAC
GGGTCCTGTTCGCTAGCGGTATCGGTTTGCTTATGGTTG
32454
32455
GTATCAATCCCCTTACGGGGAAGCATCTCTTGCAAC
AAGTGATAGACGCCTTCCTACAAGGAAAGATGGGTGAAAAGA
32532
32533
GTATCAATCCCCTTACGGGGAAGCATCTCTTGCAAC
TAGCTTTTTGGAAAAAGGTGGATTTACCATCCTGGACA
32606
32607
GTATCAATCCCCTTACGGGGAAGCATCTCTTGCAAC
ATAGCAAAAGCGGGGCGGCTTCTATCGCCCTTTCGGT
32679
32680
GTATCAATCCCCTTACGGGGAAGCATCTCTTGCAAC
TCGTTCCCGGAACCCCCTTGGGCGGGCGAAAGACGGCGGGG
32756
32757
GTATCAATCCCCTTACGGGGAAGCATCTCTTGCAAC
32792
Left flanking sequence : Till position 32232 (length
bp)
GCTTTTCAAGAGATTCGCCAATTTCACCCGGCGCGTGTCGTCAGGGATGTCGTAGGCAATGGCATAGAGG
CGCTTGGGCATAGAATCAAGAATACAACAA
Right flanking sequence : From position 32792 (length
bp)
GGCAACCCCTTAGGAATAGCGTCCTGGAGGGCACGCTTTGGAGGGGGTTTTCTGAGAAAGATGAAGTCTG
GAATATGCACACGCCGTATAAGGGCCATTT
Print the CRISPR sequence : From position
bp To position
bp