Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP016393_1                                                                                                                 top


Strain : Lactobacillus delbrueckii subsp. bulgaricus GCF_002000885 RefSeq :NZ_CP016393 (chromosome circular)
CRISPR id : NZ_CP016393_1
DR consensus (36 bp) : GTTCTCGTCTCCTTCTAGCGGAGATAAGTTGTTAGCNumber of repetitions :12
Begin Position : 47653 End Position : 48533

47653GCTTATGTCTCCTTTTAACGGAGATAAGTTCGTGTAATGTGAAAAGCAGAATGAGTCTCTGTAAGGAATAAAA47725
47726GTTCCCGCCTCCTTCTAGCGGAGATAAGTTGTTAGCACAATGTGGACTGCGTGATCATGGTCAGACCGACTATGTCACT47804
47805GTTCTCGTCTCCTTCTAGCGGAGATAAGTTGTTAGCTATATTTTTTTAGGAAAGTAATTCGCACTAGTGCGAAAGGGAGA47884
47885GTTCTCGTCTCCTTCTAGCGGAGATAAGTTGTTAGCACAATCAGAGTTTGGAAGCTGTAAACAAAAAATACATTTCT47961
47962GTTCTCGTCTCCTTCTAGCGGAGATAAGTTGTTAGCAGACCCTCACGGCTTAATCAACTGTTTTCGAGCGTGATAGATAG48041
48042GTTCTCGTCTCCTTTTAGCGGAGATAAGTTGTTAGCACTCAATCACAACTAACTAAGGAGAGTATACACC48111
48112GTTCTCGTCTCCTTCTAGCGGAGATAAGTTGTTAGCGTCGATGAAGCGATCGAACTAGGGAAGGAGAAGAAGTACAAAGA48191
48192GTTCTCGTCTCCTTCTAGCGGAGATAAGTTGTTAGCAGTTGCGCCATGTCAAGTGAAACTATGCATTTTTTAGAAGAAATTTTTA48276
48277GTTCTCGTCTCCTTCTAGCGGAGATAAGTTGTTAGCTGGCGTTTTGTGAAAAGATAAACGCCGGCCGAAAA48347
48348GTTCTCGTCTCCTTCTAGCGGAGATAAGTTGTTAGCTTATTAATCATTACGCAATCACGGCCGGCAAATCTGCCCC48423
48424GTTCTCGTCTCCTTCTAGCGGAGATAAGTTGTTAGCAATGGTCAAGTATTGTGCTCAATATGACATTGACGAGG48497
48498GTTCTCGTCTCCTTCTAGCGGAGATAAGTTGTTAGC48533
Left flanking sequence : Till position 47653 (length bp)
GTTGCCAAACTTTACTCTGTTTACCTCTTCAGTCTAGTCCATTTTGGACGGAATGAAGGAGGTTTTTTAT
ACGAAAAAACGGCCAGCAACTGGCCGTTTG
Right flanking sequence : From position 48533 (length bp)
AGATCCTGTTTAAAACGTTATTACGTCGCGCATCCCCAAGCATTTGTCTCGTCTAAATCCTGGTCAACGC
CCATCAAACAGCATCTCTCTTTGTCCTATT
Print the CRISPR sequence : From position bp To position bp