Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP016463_2                                                                                                                 top


Strain : Bosea sp. RAC05 GCF_001713455 RefSeq :NZ_CP016463 (plasmid pBSY19_1 cir)
CRISPR id : NZ_CP016463_2
DR consensus (28 bp) : GGTCCATCCCCGCGCGTGCGGGGGAGACNumber of repetitions :18
Begin Position : 95513 End Position : 96577

95513TCATAATCCCCGCCCGTGCGGGGGAGCTCGACCCGTCAGCGGGACGGCGGTCATGGAGATG95573
95574GGTCCATCCCCGCGGGTGCGGGGGAGACAAGAGCGCCTGATCGTCAGTGATGCGACCCTTC95634
95635GGCCCATCCCCGCGCGTGCGGGGGTAGCCGATAGCCTCGCGCATCATGTTGGAGGTCACAGC95696
95697GGTCCATCCCCGCGCGTGCGGGGGAGCCCGCTCTTCGACCGAAGGATCGGTGATGATGTAC95757
95758GGTCCATCCCCGCGCGTGCGGGGGAGACGAGCGGCGCGAGGCGACGTCTTCCGGTCGCGAA95818
95819GGTCCATCCCCGCGCGTGCGGGGGAGACGACCTCTTGGGGCGGTCGCGACGGCGGGGCTGC95879
95880GGTCCATCCCCGCGCGTGCGGGGGAGACTGAAGACCTCGATACGAGCTTCGTCCTCCAGCG95940
95941GGTCCATCCCCGCGCGTGCGGGGGAGACCGGATTGTCGAGGAGCACCGCCGGGCCGGTCAG96001
96002GGTCCATCCCCGCGCGTGCGGGGGAGACACTCATGCTTCTCGGCGCCGCCTTGTACGCCCG96062
96063GGTCCATCCCCGCGCGTGCGGGGGAGACTTTCGATCGAGCTCGTCCTCCCGCTCCGTGGCC96123
96124GGTCCATCCCCGCGCGTGCGGGGGAGACGTCCGAAAATCGAGTGGGATCATTTGAGATCGA96184
96185GGTCCATCCCCGCGCGTGCGGGGGAGACAGGACGGAGCCTGCCGCGCCAGGGTGGCTCGCA96245
96246GGTCCATCCCCGCGCGTGCGGGGGAGACCGCCCACGTCTGAAGACGGTCGTATGCTATGAC96306
96307GGTCCATCCCCGCGCGTGCGGGGGAGACGAGGCAGCACGGTCTGGCGACCGTCACTCAGGA96367
96368GGTCCATCCCCGCGCGTGCGGGGGAGACTGAAGGACGTCCTGTACTACGTCCTCGATGCG96427
96428GGTCCATCCCCGCGCGTGCGGGGGAGACTCACCCTGAGCCGCCATGACGGCACAGATATCG96488
96489GGTCCATCCCCGCGCGTGCGGGGGAGACGTTACCGGAACGGCAGGCACTGGTGATATCTGC96549
96550GGTCCATCCCCGCGCGTGCGGGGGAGAC96577
Left flanking sequence : Till position 95513 (length bp)
CTTGTCCATGAGGCTATCATCTCTATCCCGAATCGAAAACACGATCCTTTATGATCGCCAATTACGGGCG
CGCGTCATCCTTATTCCGTATCGATGTGAG
Right flanking sequence : From position 96577 (length bp)
TCTAGGTGCTAAACCTCGGTGAAGAATCGACTTTTCAAATAGCAGCCGAATCTAGCTCGTGATCAGCGGG
CCTGCCAAGGCACATCTAGGCCTCTCAGCG
Print the CRISPR sequence : From position bp To position bp