Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP016916_7                                                                                                                 top


Strain : Parageobacillus thermoglucosidans GCF_001902495 RefSeq :NZ_CP016916 (chromosome circular)
CRISPR id : NZ_CP016916_7
DR consensus (30 bp) : GGTTTTATCTTACCTATAAGGAATTGAAACNumber of repetitions :34
Begin Position : 2529363 End Position : 2531597

2529363GGTTTTATCTTACCTATAAGGAATTGAAACCTCAACGATGAAGAATCCATACTATAATATCTGCAGATA2529431
2529432GGTTTTATCTTACCTATAAGGAATTGAAACTTGTGTGAAGTTCTTTTTCTTCCCCTGTTGTTGAAT2529497
2529498GGTTTTATCTTACCTATAAGGAATTGAAACTCGTACCATTCGACTTTGGTGTATTCGTTGTTGTC2529562
2529563GGTTTTATCTTACCTATAAGGAATTGAAACATGCGAGAAACAAATCACTTTCTCCAAACAAAAAA2529627
2529628GGTTTTATCTTACCTATAAGGAATTGAAACTCTTTCCACGCTAATGATAAAAACCAAGCCATGAT2529692
2529693GGTTTTATCTTACCTATAAGGAATTGAAACATGGCCTTCACTGCGGAACGCGGCAATTCGAACCGT2529758
2529759GGTTTTATCTTACCTATAAGGAATTGAAACAATGAAAGAAAACAAAGAAAAAGTCATTGACGTTTCT2529825
2529826GGTTTTATCTTACCTATAAGGAATTGAAACGAGTCTTTAGTTAGGACGTTTTCTGATTCGGAAAC2529890
2529891GGTTTTATCTTACCTATAAGGAATTGAAACCGCTACATATCTATCGAAAGGAGGGACGAGTATGGCAC2529958
2529959GGTTTTATCTTACCTATAAGGAATTGAAACTGGAAAAGGAAGTCGGGCATTGGAAAGAGCTTTTCGAA2530026
2530027GGTTTTATCTTACCTATAAGGAATTGAAACTTGGATATCCATACTTTTCTATCATGGCATGCTTCG2530092
2530093GGTTTTATCTTACCTATAAGGAATTGAAACAGAACACCAGCAATAAATGATTCCCCCGGCGAACAA2530158
2530159GGTTTTATCTTACCTATAAGGAATTGAAACAAGCTGGCAGCGTTCGGCAGGCGCTCCGCCTGTCGAGG2530226
2530227GGTTTTATCTTACCTATAAGGAATTGAAACCGTCGAATTCGAATTTTTCGCCGTAAAAGTCTGTGCC2530293
2530294GGTTTTATCTTACCTATAAGGAATTGAAACAAAGGTGGCCAAGGTGTTTTGAAGCGCGGCACCGTG2530359
2530360GGTTTTATCTTACCTATAAGGAATTGAAACACAAAGAGCTTGAAAAAATTCCGGTCCGCATCGACGA2530426
2530427GGTTTTATCTTACCTATAAGGAATTGAAACTTTTCTTCTCGGAGCCTTTTCTTTGCGAGCCGTATTG2530493
2530494GGTTTTATCTTACCTATAAGGAATTGAAACCACGATGAAACCACTAGGAATTGTCCGCAAAATCGAC2530560
2530561GGTTTTATCTTACCTATAAGGAATTGAAACATCGGTCTAACCGATAAACTAGTACAATATCGATA2530625
2530626GTTTTTATCTTACCTATAAGGAATTGAAACGAACTGTATGCTATATCTTTTTCAATATGGCTGAACA2530692
2530693GTTTTTATCTTACCTATAAGGAATTGAAACAATGCCCCGACTTGCACGCGATAAACCTTCCCTTGTGT2530760
2530761GTTTTTATCTTACCTATAAGGAATTGAAACTGTAGGGAAAGCCAGTGGATGGATCGCGTCTATTT2530825
2530826GTTTTTATCTTACCTATAAGGAATTGAAACAACAAGTAAATATGAATGAACACCAAGCTGCAGCTCTT2530893
2530894GTTTTTATCTTACCTATAAGGAATTGAAACACGATAGAATCATGCTTCTATCTAATGAAATGATATTTT2530962
2530963GGTTTTATCTTACCTATAAGGAATTGAAACACATTTGCAAGGTGGGAAAATGAAGAAAAGTATAAG2531028
2531029GGTTTTATCTTACCTATAAGGAATTGAAACGAGCCGAGTCGCCGCGTTAGTTTGGGGTTGAGCTAAT2531095
2531096GGTTTTATCTTACCTATAAGGAATTGAAACGGCATCTCCCTCGAGGAACTAGCCGCCGCAACTGAAG2531162
2531163GGTTTTATCTTACCTATAAGGAATTGAAACTGGAAGAAAAAGATTTCGAAAATAAAAATAAATAAGGGC2531231
2531232GGTTTTATCTTACCTATAAGGAATTGAAACAATGGCTAGCGGTCGGGAAGCGTGCCGGCCTTTCTTT2531298
2531299GGTTTTATCTTACCTATAAGGAATTGAAACCTCACACCCTACCAACACCTTATCCACAAACTTATC2531364
2531365CGTTTTATCTTACCTATAAGGAATTGAAACATATATCGAACCTTCACCAACATAGCTCGCTGCGTTGT2531432
2531433AGTTTTATCTTACCTATAAGGAATTGAAACTCGGCTTGCCATCATCAGCGCGTAGGTCGCCATCCCA2531499
2531500CGTTGTATCTTACCTATAAGGAATTGAAACGAAGTAATCTTGAAAACAGCAGCACAGGCTGCCTTGGA2531567
2531568GTTTTTATCTTACCTATAAGAAATTAAAGC2531597
Left flanking sequence : Till position 2529363 (length bp)
GACAGACATCAGCATTTTTTTATATTGACGCAATTTTCAAAACGGCGTATACTATACATATCCATTATCC
ACCATCCTTGATATATTAGCATTTATTGGG
Right flanking sequence : From position 2531597 (length bp)
ACTGACAATCTATATCCAAAAGAGCTAACACTTAATGATCCCCCTTTAAGTGGACAGTGTAAAAAGCCCA
TTTTTAATCAATGGGTGTTCCACTATACTT
Print the CRISPR sequence : From position bp To position bp