Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP017603_4                                                                                                                 top


Strain : Clostridium formicaceticum GCF_001854185 RefSeq :NZ_CP017603 (chromosome circular)
CRISPR id : NZ_CP017603_4
DR consensus (30 bp) : ATTTACATTCTACTGTAGTTCTATTAAAGGNumber of repetitions :28
Begin Position : 3724927 End Position : 3726743

3724927ATTTACATTCTACTGTAGTTCTATTAACGGCCCGCCTTATGGTCCTTACTGCTTCTTTTTTCTCAT3724992
3724993ATTTACATTCTACTGTAGTTCTATTAAAGGGGATATGTCAAAACTGAAATAGATTTACTTATTGG3725057
3725058ATTTACATTCTACTGTAGTTCTATTAACGGGCGATAGATGAAGTAGCACTGCTTATAATACATCT3725122
3725123ATTTACATTCTACTGTAGTTCTATTAAAGGATGATAGAAGGTTATAATATTTATGTTCGTGATAC3725187
3725188ATTTACATTCTACTGTAGTTCTATTAAAGGAAATATGCTGTCTCAGCACAATAAGCACCTTCCATCT3725254
3725255ATTTACATTCTACTGTAGTTCTATTAAAGGTAACTTTAGATATGCTGCTATAATTTTGGCTACCTT3725320
3725321ATTTACATTCTACTGTAGTTCTATTAAAGGATTCCTCCCTTATTTTATTGTATCGAGGGACAAGT3725385
3725386ATTTACATTCTACTGTAGTTCTATTAAAGGGATACAGATTATCAATATAGGGAAGAATTTCCTGA3725450
3725451ATTTACATTCTACTGTAGTTCTATTAAAGGGAGATCATATCTTCTGAAAGGTATCTTGAATCTGTTCT3725518
3725519ATTTACATTCTACTGTAGTTCTATTAAAGGTTAAAATCACTTCAGGTTTCACAATGTTAATAGTTCT3725585
3725586ATTTACATTCTACTGTAGTTCTATTAAAGGGCTATACCCCTTGTAAAACACTCTGCTTTTTTATCA3725651
3725652ATTTACATTCTACTGTAGTTCTATTAAAGGGATTAGCAGCTATTAACGCAAAGACCAATATACAAGC3725718
3725719ATTTACATTCTACTGTAGTTCTATTAAAGGTTTACCTTTTGCACTCTTTTTTTATTTCTTTAACCAA3725785
3725786ATTTACATTCTACTGTAGTTCTATTAAAGGAATTTTCAAACGCAAGTGAACTATAATCATGTTTAA3725851
3725852ATTTACATTCTACTGTAGTTCTATTAAAGGTGTATTTTTGCAGGCTTTGCCTGCAATATGTAACAAT3725918
3725919ATTTACATTCTACTGTAGTTCTATTAAAGGACTATAGTCCGAAAGGGTGGTAGAGATGATCCAAA3725983
3725984ATTTACATTCTACTGTAGTTCTATTAAAGGGCAGATCTTGCAAAAGAAGATTATTCTTTTCCTGT3726048
3726049ATTTACATTCTACTGTAGTTCTATTAAAGGGAAGCCAATCAAGTATTTGTTTCACTGTTTTTGGGTT3726115
3726116ATTTACATTCTACTGTAGTTCTATTAAAGGGCCGCATGAGCATCTTCAAAATCTACAAACAATTGT3726181
3726182ATTTACATTCTACTGTAGTTCTATTAAAGGTGTGCCAGTAGAAACCGCAACGGAGATTATTAAGA3726246
3726247ATTTACATTCTACTGTAGTTCTATTAAAGGCTTCTGTTACGTTAAGTGTTCCAGCTGCTTCTATTAA3726313
3726314ATTTACATTCTACTGTAGTTCTATTAAAGGTAGGGCAACATCAGGGGCTTTGTGTGAAGCCTTATG3726379
3726380ATTTACATTCTACTGTAGTTCTATTAAAGGCCATATTCATCCCCCTTTTGAATATCTGTCTAATAA3726445
3726446ATTTACATTCTACTGTAGTTCTATTAAAGGTAGCTTTGTGAACTGAACCCTCTACAATAATATAAGG3726512
3726513ATTTACATTCTACTGTAGTTCTATTAAAGGCAACTTTTTCGTTTGATATTTTGGGTGTTGCTATTGTT3726580
3726581ATTTACATTCTACTGTAGTTCTATTAAAGGAAGACAATACAGTATTTTAGACAGCAGGGTTTTAAAA3726647
3726648ATTTACATTCTACTGTAGTTCTATTAAAGGTTTTAGAAGGGTGTTTTTTTATGCCTTTTAAAAAGG3726713
3726714ATTTACATTCTACTGTAGTTCTATTAAAGG3726743
Left flanking sequence : Till position 3724927 (length bp)
TACTGTGCTATCTTTAGTATGTTTGTTTTTATTTTTCTACGGTTGTATTTCTATTTGTTAAAGGATCTTG
CCCTGTGTATTTCTCTTTTTCTACTTTTTT
Right flanking sequence : From position 3726743 (length bp)
TCGCTCATTTTAAAGCATTTATACTACTGGCTTGTACACTTACTTTCTGTCCAAGTGTGGTTTAAAAGTC
ATTTAAAGTTATATTGAGTACATCTTTTTT
Print the CRISPR sequence : From position bp To position bp