Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP017869_1                                                                                                                 top


Strain : Campylobacter coli GCF_001865475 RefSeq :NZ_CP017869 (plasmid pCCDM116L ci)
CRISPR id : NZ_CP017869_1
DR consensus (24 bp) : TTACATTTAAGTCAATTTTATTTGNumber of repetitions :2
Begin Position : 18526 End Position : 18622

18526TTACATTTAAGTCAATTGTTTTTTTAAAGTCCCTATTTTCCATATGTTCTTTTCGTAAAAATGTCAAAAATCA18598
18599TTACATTTAAGTCAAAAATCATTA18622
Left flanking sequence : Till position 18526 (length bp)
TCTGTTTGGAGTTTTTTAAAATAAAAGTTCAAAAATTTTAATTTTTGATTTACCTTATTTAATATTATAA
AATTTAATAAATTTAAGAATTTAGGAATTA
Right flanking sequence : From position 18622 (length bp)
CATTTAAGTCAATTTTATTTGGGAATAAGAGAAGAATTTAACAATTTTTGTTGACTTTAATGTAATAGAT
GCTTACATTTAAGTCAATTTTATTTGATAA
Print the CRISPR sequence : From position bp To position bp