Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP018139_3                                                                                                                 top


Strain : Halolamina sediminis GCF_001886615 RefSeq :NZ_CP018139 (chromosome circular)
CRISPR id : NZ_CP018139_3
DR consensus (23 bp) : CGGTTCATCCCCGCTCGCGCGGGNumber of repetitions :6
Begin Position : 3485490 End Position : 3485817

3485490CGGTTCATCCCCGCTTCCGAGGGGAACACTCTTCCCCGTTGGCCTTGACGGTGGTGTAGAG3485550
3485551CGGTTCATCCCCGCTCCCGCGGGGAACACCAGGCGATCCTCGAGGTCACCGGCCCCGTGAC3485611
3485612CGGTTCATCCCCGCTCGCGCGGGGAATACTTGAGGTCATTCCAGTACGGCAGCTCGGCGGT3485672
3485673CGGTTCATCCCCGCTCGTGCGGGAAACACTTGTCGGGCACCGGGCGCTTGCCGTTCAGCCA3485733
3485734CGGTTCATCCCCGCTCACGCGGGGAACACTCATCACTCCGTGGGGCTCTCATCACTACAGA3485794
3485795CAGTTCATCCCCGCTCGCGCGGG3485817
Left flanking sequence : Till position 3485490 (length bp)
TTGCTGCTGCAATTCCCTACTCCCACCCTCAGTGCATGTAGGTTTTGAAACCATAACCTGCCCGCAATGG
CTTTGGGCCTCGCTTGCGCGGTTAGTCACT
Right flanking sequence : From position 3485817 (length bp)
TTGACCTTTCCCCCATAAACCGGTCCACTCGCAATGTGAGAAACCGCCACTTACGGACCATGCCGCGTGG
CGGTTTTCATGTGCGGATGATCTGGGTTCC
Print the CRISPR sequence : From position bp To position bp