Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP018216_1                                                                                                                 top


Strain : Lactobacillus delbrueckii subsp. delbrueckii GCF_001888945 RefSeq :NZ_CP018216 (chromosome circular)
CRISPR id : NZ_CP018216_1
DR consensus (36 bp) : GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCCNumber of repetitions :15
Begin Position : 801361 End Position : 802320

801361GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCCCACTCTGCTTGACCAAGTCTTGCATTGTCT801426
801427GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCCTTGGCTGAGTTTGAGGCCTTGGAAGTGTCT801492
801493GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCCTGGAAGCTCAAAAAGCTGGTACTGGTTTAC801558
801559GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCCCCACTTACGCTACTGTTTTACCAACTAAGA801624
801625GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCCCCACTTACGCTACTGTTTTACCAACTAAGA801690
801691GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCCAAGCACACGGCTGAGGAGATTAGCACGACC801756
801757GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCCCCTCCTACAGTGCTTTAGCCGCCTGGCGAC801822
801823GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCCGTACTCTTCCTGGATCTTCTCCTGGTCCAG801888
801889GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCCCGTTGTAGCCCGTCTGCCCAAAGATCGTGT801954
801955GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCCACGTCAAAAGTTTACTTAGAGTTTTGAAGG802020
802021GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCCAGGAGCGGAAGCTCTTTGGCTAATTGATGA802086
802087GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCCGCTACCGCATGAAGCGGTCTGTAAACGCCT802152
802153GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCCAAGGAGTTTTTTCAATGAGCCTGGCAATCC802218
802219GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCCACAGATTGAGTTCACGATTGCTGGGGATCC802284
802285GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC802320
Left flanking sequence : Till position 801361 (length bp)
AAGGATCAGGTTGTATATGGTGATGCAAAATTCAGTTATATCGATGAAGACCTTGTTGATTGGTACTAGC
CTTCTATTAAAGCTGTGTTAAAAAATAACG
Right flanking sequence : From position 802320 (length bp)
GTTGTGTAGGTTCAAATCCTGTACTCTCCTTGTTTTGGAATATTTCCATTCAATGTTGTCAATTTTCCCG
ACGTATGTTGGGGGTGGCCATTATAATGGC
Print the CRISPR sequence : From position bp To position bp