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CRISPRs details
NZ_CP018809_1
Flanking alignement tool
Page manual
  
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NZ_CP018809_1                                                                                                                 
top
Strain :
Lactobacillus jensenii GCF_001936235
RefSeq :
NZ_CP018809 (chromosome circular)
CRISPR id :
NZ_CP018809_1
DR consensus (36 bp) :
GTTTTTCAACTTACTGATTTAACAACCTTCTAAAAC
Number of repetitions :
25
Begin Position :
1376549
End Position :
1378168
1376549
TTTTTTCAACTTACTGATTTAACAACCTTCTAAAAC
ACTAACCTTAAATATTCATCGACTACTTTT
1376614
1376615
GTTTTTCAACTTACTGATTTAACAACCTTCTAAAAC
CTCGCTATTGAGTTGCGACTTCAAGTTTTC
1376680
1376681
GTTTTTCAACTTACTGATTTAACAACCTTCTAAAAC
ATCTTTTCTGCAACTGCCCATTCTGGTAGT
1376746
1376747
GTTTTTCAACTTACTGATTTAACAACCTTCTAAAAC
TTAGAAACATTAATCTTATTGTCTTTAGCC
1376812
1376813
GTTTTTCAACTTACTGATTTAACAACCTTCTAAAAC
TAGCTCATCGGCAATTTCCTGCAAAAATTT
1376878
1376879
GTTTTTCAACTTACTGATTTAACAACCTTCTAAAAC
CTAGTTAAGTCAATATAGCCACTAGGCGTA
1376944
1376945
GTTTTTCAACTTACTGATTTAACAACCTTCTAAAAC
AAGAAGCTTGACAGAGAAATTGAAAGTAGT
1377010
1377011
GTTTTTCAACTTACTGATTTAACAACCTTCTAAAAC
ACACTAAAAATGATGCTGAAAAAGCTTTAG
1377076
1377077
GTTTTTCAACTTACTGATTTAACAACCTTCTAAAAC
AGCCATCTAATGCTTCAGGCTTGATATATT
1377142
1377143
GTTTTTCAACTTACTGATTTAACAACCTTCTAAAAC
TTGTGCAATATCCTTATTACGTATTGTCTT
1377208
1377209
GTTTTTCAACTTACTGATTTAACAACCTTCTAAAAC
TTACATGTATGTATGCAGATTAAAATAGAG
1377274
1377275
GTTTTTCAACTTACTGATTTAACAACCTTCTAAAAC
GCTCAATAGTCTTGTTTACTACTTTAAACA
1377340
1377341
GTTTTTCAACTTACTGATTTAACAACCTTCTAAAAC
AACTGATAAATGGAAGGCCTGCCAGTATCC
1377406
1377407
GTTTTTCAACTTACTGATTTAACAACCTTCTAAAAC
TGGAAGGTATATCCTACACAGTATCCTAAT
1377472
1377473
GTTTTTCAACTTACTGATTTAACAACCTTCTAAAAC
ATCAACCAATGTTAACTCGTGAAATCAAGA
1377538
1377539
GTTTTTCAACTTACTGATTTAACAACCTTCTAAAAC
CAGATGGATCCTATTCACTTGCTGATTCAA
1377604
1377605
GTTTTTCAACTTACTGATTTAACAACCTTCTAAAAC
GTCATATTTAGGGTTCTTCAAGTCCTTACT
1377670
1377671
GTTTTTCAACTTACTGATTTAACAACCTTCTAAAAC
GACGCAGACAATATAGCAAAAGCAGTTTTA
1377736
1377737
GTTTTTCAACTTACTGATTTAACAACCTTCTAAAAC
TTAAAAATTACAGTCAAGGCATACTTTGGT
1377802
1377803
GTTTTTCAACTTACTGATTTAACAACCTTCTAAAAC
AACAGTTGGATTACTACCGCAAAAAGTATC
1377868
1377869
GTTTTTCAACTTACTGATTTAACAACCTTCTAAAAC
TTGACGTAATGACCTAATTCGTGTCCTGCT
1377934
1377935
GTTTTTCAACTTACTGATTTAACAACCTTCTAAAAC
AAGCAAGCTGAAGCTGTAAATGAAGTAATA
1378000
1378001
GTTTTTCAACTTACTGATTTAACAACCTTCTAAAAC
ACTTCATCCCCAACAGCGAACTGATAGTGA
1378066
1378067
GTTTTTCAACTTACTGATTTAACAACCTTCTAAAAC
TGGTGGATGAAATTGGGCTGGGCCTTTGGA
1378132
1378133
GTTTTTCAACTTACTGATTTAACAACCTTCTAAAAC
1378168
Left flanking sequence : Till position 1376549 (length
bp)
ATAGCCTACTGGTGTCTGAAAAAATTTAAGAAATGTCCACATACTTAGTTTTCTCCTCAAATTAAAATAT
GATCATATTAATTAAATTGGTTTTTGTTAC
Right flanking sequence : From position 1378168 (length
bp)
CGACATTTTATCATCAGCTTCTCAGATTTAAAATCAGTACCAGTCGACAAAATCCTCATCAATATAACAG
ACTCTTGCATCCCCACTAACAACCTTAAAA
Print the CRISPR sequence : From position
bp To position
bp