Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP018827_1                                                                                                                 top


Strain : Enterococcus faecium GCF_001953235 RefSeq :NZ_CP018827 (plasmid p1_ISMMS_VRE)
CRISPR id : NZ_CP018827_1
DR consensus (23 bp) : TCAGAGGGTATGAAAATCATACCNumber of repetitions :3
Begin Position : 244103 End Position : 244230

244103TCAGAGGGTATGAAAATCATACCCACCCTCGACGAAAAATCAGACGCTGAATCCCTTGGGGCT244165
244166CAAGAGGGTATGAAAATCATACCGTGCCAAAACGTTGATAAA244207
244208TCAGAGGGTATGAAAATCATACC244230
Left flanking sequence : Till position 244103 (length bp)
TAATCCTAATAGACTATATCTAGCAGAATTAAAAGTCTCAGAAAATGATATCTACTTACTCGAAAAATTT
GATAGAGAGAATAGGGAAAACGTTGATAAA
Right flanking sequence : From position 244230 (length bp)
AGAACTTAATAATAATATATTAGACACTAATAGACACAATATAGACACTGAAAAAGACCGCCTACAAGAT
CAATTGTTGTTAGACAATTTTGAGACAATT
Print the CRISPR sequence : From position bp To position bp