Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP019082_33                                                                                                                 top


Strain : Paludisphaera borealis GCF_001956985 RefSeq :NZ_CP019082 (chromosome circular)
CRISPR id : NZ_CP019082_33
DR consensus (32 bp) : GTTTCAATCCGCGTCCCCGTGAGGGGACGAACNumber of repetitions :76
Begin Position : 6166151 End Position : 6171175

6166151GTTTCAATCCGCGTCCCCGTGAGGGGACGAACGCGACGCAACGGCGGCGGAGATCCGCAGCCAGGTC6166217
6166218GTTTCAATCCGCGTCCCCGAGAGGGGACGAACGCGATCTCGACGACGGGGACCCCTCGCAAGAGGAG6166284
6166285GTTTCAATCCGCGTCCCCGTGAGGGGACGAACCAGTCGGGCCGCCCGTCTCTCTTGAAGTGCTCGGA6166351
6166352GTTTCAATCCGCGTCCCCGTGAGGGGACGAACTCCGAGGCCGGCGGCTTACGCCGTCTGAAGCAGC6166417
6166418GTTTCAATCCGCGTCCCCGTGAGGGGACGAACTCGAGGGCTTTCTGCTTCACTTCGAAGGCCCG6166481
6166482GTTTCAATCCGCGTCCCCGTGAGGGGACGAACGAATACTGGAGTCATCCCCGTCTCGCCGTCCCAT6166547
6166548GTTTCAATCCGCGTCCCCGTGAGGGGACGAACGCTGTTCCGGCCTTCGGGATCGCGCCCCAGTCGAG6166614
6166615GTTTCAATCCGCGTCCCCGTGAGGGGACGAACATGTCGCCGGGAGTGATCTCATCCGACGCATGCT6166680
6166681GTTTCAATCCGCGTCCCCGTGAGGGGACGAACCAGGCCGCGCAGGTCGATCGGCTCGGCGCACCGTAG6166748
6166749GTTTCAATCCGCGTCCCCGTGAGGGGACGAACCGAGGGCTCTCCCGGACCCGATCCCTTTTGGCCG6166814
6166815GTTTCAATCCGCGTCCCCGTGAGGGGACGAACGCCCCACGTTTTGGCGTAGGTTCCGACGGTCTTGC6166881
6166882GTTTCAATCCGCGTCCCCGTGAGGGGACGAACGGAGATCAGGCGATCCGGGCCGCCGGCCCTGATG6166947
6166948GTTTCAATCCGCGTCCCCGTGAGGGGACGAACTGGGCTTCCCCCTCTCCCGTCGCGTCCCGCTTAATT6167015
6167016GTTTCAATCCGCGTCCCCGTGAGGGGACGAACGGCGGCCTGGTTGATCAGCTCTTCGCGGTGGGCCA6167082
6167083GTTTCAATCCGCGTCCCCGTGAGGGGACGAACTGGAGCTTGGCGTTCTGCTGCGCCTGACGCGCGGCG6167150
6167151GTTTCAATCCGCATCCCCGTGAGGGGACGAACGCCGGAGGTCGTCGAGGGATTTCTGCTTCACTTC6167216
6167217GTTTCAATCCGCGTCCCCGTGAGGGGACGAACGAGGCACATGCCGGGGATCGACAGCACGCTCA6167280
6167281GTTTCAATCCGCGTCCCCGTGAGGGGACGAACACGCCCAACGCCGCACCGACGGCGATCGGAAAG6167345
6167346GTTTCAATCCGCGTCCCCGTGAGGGGACGAACAACGTCATGCTCACCGCCGCCAAGGTGAGCGAG6167410
6167411GTTTCAATCCGCGTCCCCGTGAGGGGACGAACTGTGGGTCTGGGGTACTCAGTTGACCGAGGCTAA6167476
6167477GTTTCAATCCGCGTCCCCGTGAGGGGACGAACGTGTACGTCATTACGCCGTCGATGATCATCTTGGC6167543
6167544GTTTCAATCCGCGTCCCCGTGAGGGGACGAACGCGACCTGGCGGCCGTCAAGACGGTCCGCGACCCG6167610
6167611GTTTCAATCCGCGTCCCCGTGAGGGGACGAACGCCTCGATCAGCTCGCCCTCGACCCGGTCGTACA6167676
6167677GTTTCAATCCGCGTCCCCGTGAGGGGACGAACTGGAGTCACTGCCGCGATTCGCCGAAACGTAATAT6167743
6167744GTTTCAATCCGCGTCCCCGTGAGGGGACGAACTCGGCCCCACGTTCTTCCCCGACTTGTTCCCGATA6167810
6167811GTTTCAATCCGCGTCCCCGTGAGGGGACGAACTCGATTGCAAACGGGGCGTAGAGCGATGTGCAGTCG6167878
6167879GTTTCAATCCGCGTCCCCGTGAGGGGACGAACCTGAGCCGAGAAAGGGGTGAACGTGTCTCACGA6167943
6167944GTTTCAATCCGCGTCCCCGTGAGGGGACGAACTCAGCCGATCCGTGATCGCGTCGTCGAGCCCATA6168009
6168010GTTTCAATCCGCGTCCCCGTGAGGGGACGAACAACTCGCCGATCGAATCCGGACAGGCGGTTGGGTC6168076
6168077GTTTCAATCCGCGTCCCCGTGAGGGGACGAACGACGAGGCCAATCCCATCAAGCGGGCCGTCTGCGA6168143
6168144GTTTCAATCCGCGTCCCCGTGAGGGGACGAACCGCACAAGACTGGAGTGACATGGACGACAGAGA6168208
6168209GTTTCAATCCGCGTCCCCGTGAGGGGACGAACGTGTTTCAGGCCGTTTCTCCCGTGTTTTCGCGG6168273
6168274GTTTCAATCCGCGTCCCCGTGAGGGGACGAACGAAACCGGGGTTCAGTTGACTTTCTTGGCTTTGTA6168340
6168341GTTTCAATCCGCGTCCCCGTGAGGGGACGAACCAGGAGCCCCGGAGCACCGCCGGGCCGAAACCCG6168406
6168407GTTTCAATCCGCGTCCCCGTGAGGGGACGAACCTCGCGAAGGGCCTCAGTTCGGCCGCCTTGGCGTC6168473
6168474GTTTCAATCCGCGTCCCCGTGAGGGGACGAACCTGGCGAGATAGCCCGGCGGCCACCGCCAGGGC6168538
6168539GTTTCAATCCGCGTCCCCGTGAGGGGACGAACGGTTGATCAGGCATCACCTGCGTCCTCTTCTAGTG6168605
6168606GTTTCAATCCGCGTCCCCGTGAGGGGACGAACCCGAGTCCATTCCAGGCCGAGCGGACATGGTCGA6168671
6168672GTTTCAATCCGCGTCCCCGTGAGGGGACGAACTCGATTTCCAGAACGCGGGTGGTGCCTGCGACGAG6168738
6168739GTTTCAATCCGCGTCCCCGTGAGGGGACGAACGTCGGGATTGGCCTTGGTCAGGGCGCGGATCGACGC6168806
6168807GTTTCAATCCGCGTCCCCGTGAGGGGACGAACCCCCGACTGTCAGCGGACGCGATTCGATGGCC6168870
6168871GTTTCAATCCGCGTCCCCGTGAGGGGACGAACGCTCGATCAACTCGCGTCCTATCGCCAGAACCAT6168936
6168937GTTTCAATCCGCGTCCCCGTGAGGGGACGAACCGTAGCAGCAAAATCCTTATACCCGTGCGAGTAGAA6169004
6169005GTTTCAATCCGCGTCCCCGTGAGGGGACGAACCTGGCGGTGAGGTTTTCCTCGGCGCCGCCGGCC6169069
6169070GTTTCAATCCGCGTCCCCGTGAGGGGACGAACGTTGAGTTCAAATGCGAGCGATGCGGAGAGACT6169134
6169135GTTTCAATCCGCGTCCCCGTGAGGGGACGAACGAGGTCTGTTCGAGGAACCGACGAGTGTAGTCGGT6169201
6169202GTTTCAATCCGCGTCCCCGTGAGGGGACGAACTTTGACGGGCGCCTTTTCGAACATCACGTTCAA6169266
6169267GTTTCAATCCGCGTCCCCGTGAGGGGACGAACCTGTTACACGGACCTCAAGCTCCGGTCGGCCGCC6169332
6169333GTTTCAATCCGCGTCCCCGTGAGGGGACGAACGGACGTCACCGATCTCGACTCCGTCGCCAACGA6169397
6169398GTTTCAATCCGCGTCCCCGTGAGGGGACGAACTCGTCCGCCCCAGGATCAACGACGGGTCGTGATT6169463
6169464GTTTCAATCCGCGTCCCCGTGAGGGGACGAACCGTGGCCACGTTGAGGTTCGACGTGATCGCCTTCGG6169531
6169532GTTTCAATCCGCGTCCCCGTGAGGGGACGAACCTGGGACGCCACGGCGCGTTCGATGATCGCCGAGTC6169599
6169600GTTTCAATCCGCGTCCCCGTGAGGGGACGAACGCCGCTCGGAGCTGTAGCCGTCGTAAAGCACTTT6169665
6169666GTTTCAATCCGCGTCCCCGTGAGGGGACGAACACGTCTCGTCGTCGCGGCCCGGCAGCGTCTTGCG6169731
6169732GTTTCAATCCGCGTCCCCGTGAGGGGACGAACCAGGTTCGACTCCTGGCCTACCCGCTCGACCGAGAC6169799
6169800GTTTCAATCCGCGTCCCCGTGAGGGGACGAACGCCTCATCGTGGCCCTGAAGGGTCTCAGGCCCGA6169865
6169866GTTTCAATCCGCGTCCCCGTGAGGGGACGAACCCGAGCCTGACCCTGGCCCCTCCGCGCACGTCCA6169931
6169932GTTTCAATCCGCGTCCCCGTGAGGGGACGAACATGCGTTGGTCGTCCAAGCCAAAGAGGCGGAACTG6169998
6169999GTTTCAATCCGCGTCCCCGTGAGGGGACGAACCTGATCTGCCAGAGGCCGTTGGCGGCGGTGTTCCCGA6170067
6170068GTTTCAATCCGCGTCCCCGTGAGGGGACGAACTACTCCCCGATGCGATGGTCAGCACCACTTTCCCG6170134
6170135GTTTCAATCCGCGTCCCCGTGAGGGGACGAACTCGCCGATCGTAAAGGTCTGCGACGAGCTGAACGT6170201
6170202GTTTCAATCCGCGTCCCCGTGAGGGGACGAACTCGGTCGCGTCGCCCCGCTTGCCGCGCGGCTGGTC6170268
6170269GTTTCAATCCGCGTCCCCGTGAGGGGACGAACATCGGCCCGTTGTGAGGGCATTTGCTTTCCTCCGT6170335
6170336GTTTCAATCCGCGTCCCCGTGAGGGGACGAACGGGTCGCGTCGAGGTGGATCACGGTGATGTAGTGGT6170403
6170404GTTTCAATCCGCGTCCCCGTGAGGGGACGAACCGTAGACGCGCCGGCCGATCATGATTTGGTCGGT6170469
6170470GTTTCAATCCGCGTCCCCGTGAGGGGACGAACATGTGATGCTTGATCCCTCGATCAACCTTCGGTGAC6170537
6170538GTTTCAATCCGCGTCCCCGTGAGGGGACGAACGGGTCGATGTCCTCGAAGTCGTCCGACTCGCCCCC6170604
6170605GTTTCAATCCGCGTCCCCGTGAGGGGACGAACGTCGTATCGGACGTAGTCCTGGGACGTGGCGTCAG6170671
6170672GTTTCAATCCGCGTCCCCGTGAGGGGACGAACGGGTTGGCCGACGCCGTCGTTCATGCCGATGCGTCGTCAG6170743
6170744GTTTCAATCCGCGTCCCCGTGAGGGGACGAACCCGAGGAGCTGAAGTTTGCCGTGCGTGAGCAAGCA6170810
6170811GTTTCAATCCGCGTCCCCGTGAGGGGACGAACTCGAGACGCTTCGAGATGCCCGTCTGAGCCACGGTC6170878
6170879GTTTCAATCCGCGTCCCCGTGAGGGGACGAACTTGGTGGACGCATCGGCGTACCTGGAGCACATCGA6170945
6170946GTTTCAATCCGCGTCCCCGTGAGGGGACGAACGATACTGTTCGTAGATAGCCTGAGCCTGATTACG6171011
6171012GTTTCAATCCGCGTCCCCGTGAGGGGACGAACAATTGGGCGGATCTCATTTTCGCTCTGTGGTCCG6171077
6171078GTTTCAATCCGCGTCCCCGTGAGGGGACGAACAAGTCGTCGCTTGTCGAGAGGTCGAGCCCGATAT6171143
6171144GTTTCAATCCGCGTCCCCGTGAGGGGACGAAC6171175
Left flanking sequence : Till position 6166151 (length bp)
GATCCAACTCGACTCGGCGGAGCGTCGGAGAGACGTTCGAATCGCGCGCGAGCCGTCGATGGGGCGCGCA
CCGTCCGACTGGACGCCGCCGCAGGATGAT
Right flanking sequence : From position 6171175 (length bp)
GCCGCGGTTCCAACTGCTGTCGGAGGCGGCGGTTAGACGTCAGTTTTCGCGAACCGGGCTCGCGAGGCAA
GGCCGGTTCGCTCCGCTTGGATATGGAATT
Print the CRISPR sequence : From position bp To position bp