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CRISPRs details
NZ_CP019403_1
Flanking alignement tool
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NZ_CP019403_1                                                                                                                 
top
Strain :
Salmonella enterica subsp. enterica serovar Apapa str. SA20060561 GCF_001975285
RefSeq :
NZ_CP019403 (chromosome circular)
CRISPR id :
NZ_CP019403_1
DR consensus (29 bp) :
CGGTTTATCCCCGCTGACGCGGGGAACAC
Number of repetitions :
40
Begin Position :
3047067
End Position :
3049474
3047067
CGGTTTATCCCCGCTGACGCGGGGAACAC
ATATCAATACCACGAACTCGACCAGTTTTATG
3047127
3047128
CGGTTTATCCCCGCTGACGCGGGGAACAC
CTGTCTATTGATGCAAGATAATTTATTGAAAA
3047188
3047189
CGGTTTATCCCCGCTGACGCGGGGAACAC
TCGATCAGCGCGTCAGCCGTAGTTGCAATACT
3047249
3047250
CGGTTTATCCCCGCTGACGCGGGGAACAC
TCAATATCCACCCCACCACCGAGGCCTGCGAC
3047310
3047311
CGGTTTATCCCCGCTGACGCGGGGAACAC
TGCGCCAAGTACAGGTAATGAACTTCGTAAGC
3047371
3047372
CGGTTTATCCCCGCTGACGCGGGGAACAC
TGAAATAGTCCAGGCTCCTGATGGAGATTTAA
3047432
3047433
CGGTTTATCCCCGCTGACGCGGGGAACAC
GTTTTAAATGCCTGGATATCTCTAATAAAGGT
3047493
3047494
CGGTTTATCCCCGCTGACGCGGGGAACAC
AAGGATGAAGGGTGCGCTAACTGACCGTTGCG
3047554
3047555
CGGTTTATCCCCGCTGACGCGGGGAACAC
AGCTGCCTCCCCGCGCTCGCACTCTCCCCACA
3047615
3047616
CGGTTTATCCCCGCTGACGCGGGGAACAC
CCATGAGAAGGTTAAAGCACTGGGGGGTCAGT
3047676
3047677
CGGTTTATCCCCGCTGACGCGGGGAACAC
TTCAGCAACACGGCGCTGATTATTGGAAATTC
3047737
3047738
CGGTTTATCCCCGCTGACGCGGGGAACAC
CATAATAATTCTTCTGGTGATTTGTTTCGCCA
3047798
3047799
CGGTTTATCCCCGCTGACGCGGGGAACAC
CGCTTTCTGCTGCCGCGCTCGCTCCCGCTTTT
3047859
3047860
CGGTTTATCCCCGCTGACGCGGGGAACAC
TCCTCCGGTACGTTGTGATCCCGATGGCTCAA
3047920
3047921
CGGTTTATCCCCGCTGACGCGGGGAACAC
TAGCCAACCTGTAAGTAATCGTGATGAGTTGC
3047981
3047982
CGGTTTATCCCCGCTGACGCGGGGAACAC
TGCCTTAAGTAAAGCGCTTCAATGCTCACCGA
3048042
3048043
CGGTTTATCCCCGCTGACGCGGGGAACAC
TTGGAATATCTCTTGTATAGGATTGCACATTG
3048103
3048104
CGGTTTATCCCCGCTGACGCGGGGAACAC
TGGTAAAGCAGATAAGGCTGCCGTTAACAACG
3048164
3048165
TGGTTTATCCCCGCTGACGCGGGGAACAC
ACCTGCCGTGACTGGAGAGCAGGTAACCCCAA
3048225
3048226
CGGTTTATCCCCGCTGACGCGGGGAACAC
TTCAAATCGACGGGGCACCGCTGCGGGTCAAT
3048286
3048287
CGGTTTATCCCCGCTGACGCGGGGAACAC
TATGAGCCGCCGTATGGTTTTAATTCAGTCGT
3048347
3048348
CGGTTTATCCCCGCTGACGCGGGGAACAC
GTTAGACGGTTATTCGCGTATTAAGGCAGCCT
3048408
3048409
CGGTTTATCCCCGCTGACGCGGAGAACAC
ACCGTCCGTTATTTCGGTGCGCTGATATGGAT
3048469
3048470
CGGTTTATCCCCGCTGACGCGGGGAACAC
TCTTTAGACTGATCTTCAACAACACACGCCGG
3048530
3048531
CGGTTTATCCCCGCTGACGCGGGGAACAC
TGCTGAAAACTCATACTTAACCATTGTATGTC
3048591
3048592
CGGTTTATCCCCGCTGACGCGGGGAACAC
GCCCAGCGGAATAATTCAACCTGGCGTAACTC
3048652
3048653
CGGTTTATCCCCGCTGACGCGGGGAACAC
TCAGTAAGCGTAAACGTTAGTGAATCACCGCT
3048713
3048714
AGGTTTATCCCCGCTGACGCGGGGAACAC
TTTGGCAGGTTGTCGTATTTGACGCAATCATT
3048774
3048775
CGGTTTATCCCCGCTGACGCGGGGAACAC
GGAGTTAATAACAATCAGTTACTATCAATAAA
3048835
3048836
CGGTTTATCCCCGCTGACGCGGGGAACAC
GTCGACACGCCGATCCCGCATTTCACCCATTC
3048896
3048897
CGGTTTATCCCCGCTGACGCGGGGAACAC
TCGCGTAACGTTGGGTGCTGTAATGAGCACGG
3048957
3048958
CGGTTTATCCCCGCTGACGCGGGGAACAC
CCGACACAGGTTAATAATAGCGGTCCTGTAAA
3049018
3049019
CGGTTTATCCCCGCTGACGCGGGGAACAC
GCGGAGCGTGGGTGATATCTCGTACCCAGCGT
3049079
3049080
CGGTTTATCCCCGCTGACGCGGGGAACAC
TGCCGGGTCTATGTGAGAGATAATAACGTAAC
3049140
3049141
CGGTTTATCCCCGCTGACGCGGGGAACAC
GTCCTTAAGGCGTTCGTAAAAATAATTAAACT
3049201
3049202
CGGTTTATCCCCGCTGACGCGGGGAACAC
ATACCGCTGGAATTTTCCAGTAACAGGTTATT
3049262
3049263
CGGTTTATCCCCGCTGACGCGGGGAACAC
CCAGTCCAGGCTATTCGCCCCACCACCGGAGC
3049323
3049324
CGGTTTATCCCCGCTGACGCGGGGAACAC
CAGTAGAAAAGAGATCCTCACATTTAGCACCG
3049384
3049385
CGGTTTATCCCCGCTGACGCGGGGAACAC
CTTCGCTCACATATCGAAAGAGGTGGTCTACG
3049445
3049446
CGGTTTATCCCCGCTGACGCGGGGAACAC
3049474
Left flanking sequence : Till position 3047067 (length
bp)
GGGCGGATTGAGCGCCGTAGCCGCGATGTAGTGCGGATAATGCTGCCGTTGGTAAAAGAGCTGGCGAAGG
CGGAAAAAACGTCCTGATATGCTGGTGAAA
Right flanking sequence : From position 3049474 (length
bp)
ACTAAAACTATATATTTGTTCTAAAAGCCCTTTTTTATTACCTAACAAACTACCAACGGTAAGATAACAA
TTCCTTATTATTAAAGAACATTCAACTTAT
Print the CRISPR sequence : From position
bp To position
bp