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CRISPRs details
NZ_CP019721_4
Flanking alignement tool
Page manual
  
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NZ_CP019721_4                                                                                                                 
top
Strain :
Veillonella parvula GCF_002005185
RefSeq :
NZ_CP019721 (chromosome circular)
CRISPR id :
NZ_CP019721_4
DR consensus (35 bp) :
GTTTCAATACCGTAAACGGTAAGAGCTGTTGCAAC
Number of repetitions :
20
Begin Position :
549989
End Position :
551458
549989
CTGCGCATACCGTAAACGGTAAGCACTGTTGCAAC
TATCGCGAAATTCGCTAGTGATAAACGTGTGCAACCGAT
550062
550063
GTTTCAATACCGTAAACGGTAAGCTGAATCCCTTA
TCACCCTTGTTTTACCTTCACTTCGTTCAGGTACTTGAGATGTGCGGACCTCATCGTCGCTTTGCTCCTCTGCTGTCTCGCACCCTT
550184
550185
CTGCGCATACCGTAAACGGTAAGAGCTGTTGCAAC
AAGGTGGAAGGCGTCGATGTATACCGTCCGGTTTTCAA
550257
550258
GTTTCAATACCGTAAACGGTAAGAGCTGTTGCAAC
AAGGTGGAAGGCGTCGATGTATACCGTCCGGTTTTCAA
550330
550331
GTTTCAATACCGTAAACGGTAAGAGCTGTTGCAAC
TCCCAAATCATTCTGAAACACCATGATAAAGATAGTAATC
550405
550406
GTTTCAATACCGTAAACGGTAAGAGCTGTTGCAAC
CAGAACGTAGCGATTTATTAGTACCAGCTGAAGTTGTGCG
550480
550481
GTTTCAATACCGTAAACGGTAAGAGCTGTTGCAAC
TTCAAGAAGAATGGAACGCTACTGATTTAATTGA
550549
550550
GTTTCAATACCGTAAACGGTAAGAGCTGTTGCAAC
GATATGGATACGATGTATGTAGATAAAGAACGCTATAG
550622
550623
GTTTCAATACCGTAAACGGTAAGAGCTGTTGCAAC
ATAATTCTCATCGGTGAGACTCTCCATTGAATATAG
550693
550694
GTTTCAATACCGTAAACGGTAAGAGCTGTTGCAAC
AAAAAAGATTTAGAATATTTAATACAAGAAAATAAGCG
550766
550767
GTTTCAATACCGTAAACGGTAAGAGCTGTTGCAAC
AATTAAAATAAAGAGAAAGGGTGAACTGTCTTGTGCACT
550840
550841
GTTTCAATACCGTAAACGGTAAGAGCTGTTGCAAC
TTTGTGCTATTGCACAATTAGTTTTAGGTAGTTATTTCTC
550915
550916
GTTTCAATACCGTAAACGGTAAGAGCTGTTGCAAC
ATGAACAAAAAGATCGAAAAGATGACTTTAGATTTT
550986
550987
GTTTCAATACCGTAAACGGTAAGAGCTGTTGCAAC
ACTGATGTAGAAGACATCGAAGTTGGTTATATTCAAG
551058
551059
GTTTCAATACCGTAAACGGTAAGAGCTGTTGCAAC
GATAGAAAACTTTCAACATACAACATCGATATTTTTTAA
551132
551133
GTTTCAATACCGTAAACGGTAAGAGCTGTTGCAAC
TAGTCATATGACCATATGTATCACGGCGTTGAATAC
551203
551204
GTTTCAATACCGTAAACGGTAAGAGCTGTTGCAAC
CCTCATTTAATTAATTAAAATTATTTTATTTTGGCA
551274
551275
GTTTCAATACCGTAAACGGTAAGAGCTGTTGCAAC
CACCGATGCCGATAGATTTAGTTGCGTTTGCCAAGATGCCA
551350
551351
GTTTCAATACCGTAAACGGTAAGAGCTGTTGCAAC
TGCAACATCTCGTTCTATTAAACCAGGCGAGAAGGTA
551422
551423
GTTTCAATACCGTAAACGGTAAGAGCTGTTGCAAC
551457
Left flanking sequence : Till position 549989 (length
bp)
GCTGAATCCTTTATCACCTTCGTTTTACCTTTACTTCGTTCAGGTACTTGAGATGTGCGGACCTCATCGT
CGCTTTGATTCTCTGCTGTCTCGCACCCTT
Right flanking sequence : From position 551458 (length
bp)
GCGTGCCTCAGAAAGCCAGTATTCATGGGCCTTAAAAATAGGTTTTGGCAAACCTCACACCGTAAACGGT
CAGATTGGGCTCCCATTTGATCAAAAATGC
Print the CRISPR sequence : From position
bp To position
bp