Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP019794_3                                                                                                                 top


Strain : Paenibacillus larvae subsp. pulvifaciens GCF_002007765 RefSeq :NZ_CP019794 (chromosome circular)
CRISPR id : NZ_CP019794_3
DR consensus (42 bp) : AGGGTTTGGAACCCTTCCGCATGAGAAGCTATACCACTAGCTNumber of repetitions :5
Begin Position : 402478 End Position : 402939

402478TGCGTTACATTTCCTTCGGCATGGGAAGCTCCACCACTAGCTATCGTACCCGAGCCTTCGGCATGGGAATCCAAGCCACTGGCTTCTGTTGCATTTCCTTCGGCATGAGAAGAGATTCCGCTGGCC402603
402604TTGGTTAGAAAACCTTCTGTATGAGACGCTATACCACTAGCTGTCGTGCTATTACCTTCCGCATGGGACTGACTTCCACTGGCTGTAGTGGAAAAGCCTTCGGCATGCGCCGTATCGGTGTTCGCA402729
402730AGGGTTTGGAACCCTTCCGCATGAGAAGCTATACCACTAGCTGTCGTTGTCGATCCTTCCGCATGGGCTGCATCGTTGCTTGCG402813
402814AGGGTTTGGAACCCTTCCGCATGAGAAGCTATACCGCTAGCTATCGTTGTCGATCCTTCGGCATGTGCTGCATCGCCGCTCGCG402897
402898AGGGTTTGGAATCCTTCTGCGTGAGATGCTGCTCCACTGGCT402939
Left flanking sequence : Till position 402478 (length bp)
AGCTATTCCGCCGGCTCTCGTACTCGCGCCTTCCGCATGGGAATCCGCTCCTATGGCTTGCGTTGCATTG
CCTTCCGCATGGGACTGATCTCCAATGGCT
Right flanking sequence : From position 402939 (length bp)
GTTGTATTCACTCCTTCTGCTGTGGAGCAAGTTCCAGTCGCATTTCGATTACAAGGATCTGCCATTTTAT
CACCCTTTACTTAGAAATAAAAGGAAGTTA
Print the CRISPR sequence : From position bp To position bp