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CRISPRs details
NZ_CP020327_2
Flanking alignement tool
Page manual
  
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NZ_CP020327_2                                                                                                                 
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Strain :
Paenibacillus larvae subsp. pulvifaciens GCF_002043025
RefSeq :
NZ_CP020327 (chromosome circular)
CRISPR id :
NZ_CP020327_2
DR consensus (30 bp) :
GTTTCAATACACCTTGTGTTACTGTCAAAC
Number of repetitions :
8
Begin Position :
1314239
End Position :
1314727
1314239
GGGTTTATCCGCCTTGTGTTACTGCCAACA
TTCAACGTAAACCGACAGAACTCTTGCTGCCGACA
1314303
1314304
ATTTCAATACACCTTGTGTTACTGTCAAAC
CATTGATTCATCTTCTTCACAATCCTCCTCTGCAA
1314368
1314369
GTTTCAATACACCTTGTGTTACTGTCAAAC
GCTAAAAAGTATGTGATTGACAGGCTCACCCACAGCC
1314435
1314436
GTTTCAATACACCTTGTGTTACTGTCAAAC
CAATTGCGTTCGGGTTGTGCTTTATACAGTAATTA
1314500
1314501
GTTTCAATACACCTTGTGTTACTGTCAAAC
CAGTAAAACCGACCAGTACCGGGCGGCGGTCCATAG
1314566
1314567
GTTTCAATACACCATGTGTTACTGTCAAAC
TCGCAAAAGAATATCTGCAAGATCCCATTTCCAGT
1314631
1314632
GTTTCAATACACCATGTGTTACTGTCAAAC
TTGACGATTAAATCAAAATCAGACGGATATCCGACA
1314697
1314698
GTTTCAATACACCTCGTGTTACTATCAAAC
1314727
Left flanking sequence : Till position 1314239 (length
bp)
ACAGTCAGAACCAAGTGGAAGCGATTCCGATCAAAGTAGTTCGAGTCTAAATGAAATTTAATGAAACCGC
AAGATTAAGTGAGTGCGTGTCCAACTTTAA
Right flanking sequence : From position 1314727 (length
bp)
CCCTAGTAAAATCAAGCTTTTCCAAAAGCCGTATGTCCACATTTTACTACAGTACCAGGGGTTTCGCAAA
ATTTTCCCAACCGAAATATACCTTAAAATA
Print the CRISPR sequence : From position
bp To position
bp