Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_FO704550_1                                                                                                                 top


Strain : Xenorhabdus doucetiae GCF_000968195 RefSeq :NZ_FO704550 (chromosome circular)
CRISPR id : NZ_FO704550_1
DR consensus (29 bp) : CGGTTTATCCCCGCACTCACGGGGAACACNumber of repetitions :81
Begin Position : 570115 End Position : 575028

570115CGGTTTATCCCCGTGCTTACGGGGAACATACATCCACTTTATAACGTCCACCTTCAAGCGC570175
570176CGGTTTATCCCCGCACTTACGGGGAACATCTCCACTTCACCAAGCGAGAAAACTATAGATA570236
570237CGGTTCATCCCCGCACTCACGGGGAACACTATTAGTGTTTTTAACCATAAGTTAATTATCG570297
570298CGGTTTATCCCCGCACTCACGGGGAACACTCAAAGTCGCCGATATCCGCCGCTGCCCGTAC570358
570359CGGTTTATCCCCGCACTCACGGGGAACACGGAGTAGGCGGACGCATTAGACGGTCGCGTTT570419
570420CGGTTTATCCCCGCACTCACGGGGAACACCCGAGAGAGACCGCCGCTATCATCAGTAAGCG570480
570481CGGTTTATCCCCGCACTCACGGGGAACACCCTCAACGCCTTGAGCTTTTGCTGATACTCGG570541
570542CGGTTTATCCCCGCACTCACGGGGAACACTCATAGGCCGAGTTATAAACTGGTCAGTAATGG570603
570604CGGTTTATCCCCGCACTCACGGGGAACACTTCTCAATGGCATAACGCTCTGCGGCCGTTTC570664
570665CGGTTTATCCCCGCACTCACGGGGAACACCCTACTGTTAGCTCGACTAATGTCAAAGTGGA570725
570726CGGTTTATCCCCGCACTCACGGGGAACACGGAATAATGGCGATTTTGAGTACTGATAATGC570786
570787CGGTTTATCCCCGCACTCACGGGGAACACATAACCGATGCCGGCATTACCGAACGGCACGT570847
570848CGGTTTATCCCCGCACTCACGGGGAACACTTTGTAATTATTGAATCGAGTCTTTATATTC570907
570908CGGTTTATCCCCGCACTCACGGGGAACACATTTCAAATATTCTGCTCTGGCGATACCCATA570968
570969CGGTTTATCCCCGCACTCACGGGGAACACGGGATGCAATTCTCTGATTACGGTAAGAATCA571029
571030CGGTTTATCCCCGCACTCACGGGGAACACAAAAAGTCAGCTATTTGTTTTAATGTTGAATA571090
571091CGGTTTATCCCCGCACTCACGGGGAACACAATAGAGCCAGTGGGTAGTTTTCCATGATGAT571151
571152CGGTTTATCCCCGCACTCACGGGGAACACTTAAAATGCTTAAAATTTGGCAGGTTTTGATAA571213
571214CGGTTTATCCCCGCACTCACGGGGAACACCTTTCCGTAAATTTGCCATTCTCCCATTCCTT571274
571275CGGTTTATCCCCGCACTCACGGGGAACACGTGGATATCATTAACCAGAAACACGCAGAAGC571335
571336CGGTTTATCCCCGCACTCACGGGGAACACTCGTACAAAATTTAATAGGAAATAAATAGATG571396
571397CGGTTTATCCCCGCACTCACGGGGAACACTGATGCCGTAGGACGGTTGGCCCCTGGTGAAC571457
571458CGGTTTATCCCCGCACTCACGGGGAACACCACCGTGGTACCCAGCACCACCAAATCCAATA571518
571519CGGTTTATCCCCGCACTCACGGGGAACACGGAAATTAAATCGCATATTGTTTCCACGAATG571579
571580CGGTTTATCCCCGCACTCACGGGGAACACCTGAACAATGCACGGTACAGAAACATATAGCC571640
571641CGGTTTATCCCCGCACTCACGGGGAACACATGTGCCGTTGCGTACAAAATATTTGAATACG571701
571702CGGTTTATCCCCGCACTCACGGGGAACACCCCTTCAGCTATAGCATCCTCCACGCTGATAT571762
571763CGGTTTATCCCCGCACTCACGGGGAACACCCAGCCCGGCATATGCTACAAATCGCTGCCAAT571824
571825CGGTTTATCCCCGCACTCACGGGGAACACGTTGAACAGGTAAAAGAAGAAATTACTAATAC571885
571886CGGTTTATCCCCGCACTCACGGGGAACACTCCTCTATAGTTGATTTAAATCGTTGTTTTAA571946
571947CGGTTTATCCCCGCACTCACGGGGAACACAATGATTATCTAAACCACGAACACATAGAATG572007
572008CGGTTTATCCCCGCACTCACGGGGAACACTAATAGCGCGGGTTGCGCAGTTCGGGGATTTG572068
572069CGGTTTATCCCCGCACTCACGGGGAACACACAGAATCCTCGTCTACCACAAACTCATCTGG572129
572130CGGTTTATCCCCGCACTCACGGGGAACACTCCCTTGTTTTTAGTTGCTATCCGTTCGTTCA572190
572191CGGTTTATCCCCGCACTCACGGGGAACACAATGATTATCTAAACCACGAACACATAGAATG572251
572252CGGTTTATCCCCGCACTCACGGGGAACACATGCCAGTGAGCATAGTAGTTTGTCGCATTGA572312
572313CGGTTTATCCCCGCACTCACGGGGAACACGAACCACTTACGAGTATCAACCCGTAATTTTG572373
572374CGGTTTATCCCCGCACTCACGGGGAACACCGGATACCATCACTTTGCAAAAACTGACTCGG572434
572435CGGTTTATCCCCGCACTCACGGGGAACACATACTGATTTGCCCCTTCAATACCAAGACTGC572495
572496CGGTTTATCCCCGCACTCACGGGGAACACTTTATATCTCTGTATCCATTTAACTAAGGGGA572556
572557CGGTTTATCCCCGCACTCACGGGGAACACAATTTCTGACGCCTCCAGTATCCGTCGCTGGG572617
572618CGGTTTATCCCCGCACTCACGGGGAACACTTAATGCCCCCGGTTAATACACCTGGCAATGT572678
572679CGGTTTATCCCCGCACTCACGGGGAACACAGGCAGTGAATGGCTAACCTAAACCAATGTAA572739
572740CGGTTTATCCCCGCACTCACGGGGAACACAGTGATAATAACACTTAGTTATTTTTTGGGTC572800
572801CGGTTTATCCCCGCACTCACGGGGAACACACTCTCCACTGCTTCATCCGGTTTATTGATCC572861
572862CGGTTTATCCCCGCACTCACGGGGAACACCACCCCTTCCGCTTTCGCGTGGGCGATAATGT572922
572923CGGTTTATCCCCGCACTCACGGGGAACACTGCAACCCCCTGAGACATAACCTCAGCGAATA572983
572984CGGTTTATCCCCGCACTCACGGGGAACACCGTGCTTTTAACGTCCACTATCCAATGATGAG573044
573045CGGTTTATCCCCGCACTCACGGGGAACACGTCAAAATCATTGATAGGATTAATGTCCAGTG573105
573106CGGTTTATCCCCGCACTCACGGGGAACACATAAACATAACTGGTGGTTCATGGTGGTGTTA573166
573167CGGTTTATCCCCGCACTCACGGGGAACACGATTAAGTAGTGCAATATTCTACTTAGGAAAC573227
573228CGGTTTATCCCCGCACTCACGGGGAACACCGGGACGGGTACACCAACCGGTAACGCTGAGC573288
573289CGGTTTATCCCCGCACTCACGGGGAACACGTTGCAGATTGCCATGATAATAAATCACGCAG573349
573350CGGTTTATCCCCGCACTCACGGGGAACACAAAAGTCGGAGCGCCAGTGATAGTAAAAGTTA573410
573411CGGTTTATCCCCGCACTCACGGGGAACACCTGAACAGGATTATGTACGTCTCCTCGGAGAA573471
573472CGGTTTATCCCCGCACTCACGGGGAACACCAGCTTGTACCAACCAGCTAGCCCATGTGTGT573532
573533CGGTTTATCCCCGCACTCACGGGGAACACCTGAGTAGGCGCGGGAAGCGATACATGAATGC573593
573594CGGTTTATCCCCGCACTCACGGGGAACACTTGGTTGATGGCTTGGTATGGACGAACACCCA573654
573655CGGTTTATCCCCGCACTCACGGGGAACACTGTTGCAGATTGCCATGATAATAAATCACGCAG573716
573717CGGTTTATCCCCGCACTCACGGGGAACACTCCAGCGCCTTAATCAGCGCATCCAACTGACG573777
573778CGGTTTATCCCCGCACTCACGGGGAACACCAGCAAGAGATGCAGAGGGAGAGTTTTATCGT573838
573839CGGTTTATCCCCGCACTCACGGGGAACACAAACGTATCAATAAACGCCCAGTAAACGCAGA573899
573900CGGTTTATCCCCGCACTCACGGGGAACACGCCATGATAATAAATCACGCAGCTTATCAACT573960
573961CGGTTTATCCCCGCACTCACGGGGAACACTATATCGGCTAGACCTGGATCATTCATACTAT574021
574022CGGTTTATCCCCGCACTCACGGGGAACACCTCCATGTACATTCTTACCGCCATATCCGCGC574082
574083CGGTTTATCCCCGCACTCACGGGGAACACGAAGCCAAGTTAGAACTGGTTAGAATGAACATA574144
574145CGGTTTATCCCCGCACTCACGGGGAACACGGAGAAGCTGGAGATGGTCAATAAATATGCTCA574206
574207CGGTTTATCCCCGCACTCACGGGGAACACTCATTGTTCATTAATCGTTTCATTCAAACCCT574267
574268CGGTTTATCCCCGCACTCACGGGGAACACCATTGTCTTGTTGTATATTTTCCGACATATTA574328
574329CGGTTTATCCCCGCACTCACGGGGAACACTGCATTATCCCCCCTGTTCACTGTGATCAAGG574389
574390CGGTTTATCCCCGCACTCACGGGGAACACTCAACACGATAACCCACGATATCCGAATTATC574450
574451CGGTTTATCCCCGCACTCACGGGGAACACATCGGCCTGAACCTGCATCAGCACTACGTCCC574511
574512CGGTTTATCCCCGCACTCACGGGGAACACACATAAGACACAAAGTCAGCGTTGGAATCCTG574572
574573CGGTTTATCCCCGCACTCACGGGGAACACATCGACCTCCAGTACAATGGCACCAACATATT574633
574634CGGTTTATCCCCGCACTCACGGGGAACACGACCAGCCATTACGTTGTTGGTTAAAGTGATT574694
574695CGGTTTATCCCCGCACTCACGGGGAACACTGGCTACGTGCCAACTCAGAGGTTAGTGAGTA574755
574756CGGTTTATCCCCGCACTCACGGGGAACACTAGAAAAAGTGGATATTAGAAACTGTTGATTT574816
574817CGGTTTATCCCCGCACTCACGGGGAACACGTAATCCACGCCCTGACTGATGACGCCTGCCA574877
574878CGGTTTATCCCCGCACTCACGGGGAACACACCACCGGGGGAATCGATATCCAGACAAATAC574938
574939CGGTTTATCCCCGCACTCACGGGGAACACGAAAAGCGCGTTCATTTTTGGTGACAGAATAT574999
575000CGGTTTATCCCCGCACTCACGGGGAACAC575028
Left flanking sequence : Till position 570115 (length bp)
ATCTAAATTCTGCTGGTTATTTTTATGACCGCCTTGTAATAATTTCACAATGTTTTTTCTTCTTTTAGGT
TATTTTTATCTGCCAAAACTGCAATAATGA
Right flanking sequence : From position 575028 (length bp)
ACCAATTTTATCCCACTGTTTTACAACCCCTTTTTAGGGCGAAAAAATTCTACCATCTTTTCCGCCTATA
AATCAGGCAAATTTTTTTCTCGAATTAGCC
Print the CRISPR sequence : From position bp To position bp