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CRISPRs details
NZ_LN831303_5
Flanking alignement tool
Page manual
  
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NZ_LN831303_5                                                                                                                 
top
Strain :
Halobacterium hubeiense JI20-1 GCF_001488575
RefSeq :
NZ_LN831303 (plasmid II circular)
CRISPR id :
NZ_LN831303_5
DR consensus (30 bp) :
GCTTCAACCGCACTAGCGTTCTGCTGTAAC
Number of repetitions :
58
Begin Position :
185156
End Position :
188926
185156
TCTGCAACCGCTCTAGCGTTCTGCTGTAAC
CCAGCAACCGCCGCCCCCCAGCCCGTCACAGCATCC
185221
185222
GCTTCAACCGCACTAGCGTTCTGCTGTAAC
GGTGCTGGAAGTGGGCGAGCGTGCGGACCTCGG
185284
185285
GCTTCAACCGCACTAGCGTTCTGCTGTAAC
TGCCGCCGGCCGCTCAGGCCGCGAATACGGGTTCGG
185350
185351
GCTTCAACCGCACTAGCGTTCTGCTGTAAC
GTGACTCCCCATGCGAGTTCTGCGCGCGAACGCG
185414
185415
GCTTCAACCGCACTAGCGTTCTGCTGTAAC
ACAGTTGCCTGCTTGTCGGCGCTGTCCCACCCGCG
185479
185480
GCTTCAACCGCACTAGCGTTCTGCTGTAAC
GGTCGCGGTCGCCCGCAGCCTCGAAGTTCGGGGC
185543
185544
GCTTCAACCGCACTAGCGTTCTGCTGTAAC
AACTGCTGGATGTGCTGCCTATCATCCCCGAATAT
185608
185609
GCTTCAACCGCACTAGCGTTCTGCTGTAAC
TGCCAGCGGGCGCCGTTGCGGCTTTCGAGGTCCGC
185673
185674
TCTTCAACCGCACTAGCGTTCTGCTGTAAC
TAACGCGAATCATAACCCGCGTAGGGTCATAATC
185737
185738
GCTTCAACCGCACTAGCGTTCTGCTGTAAC
TCGATCTGGTGTGCTTCGCCGTCGACGAGCTGATA
185802
185803
GCTTCAACCGCACTAGCGTTCTGCTGTAAC
CGCGCCGGAGAGATCTGCCACAGCTCCGAATCCTGGGT
185870
185871
GCTTCAACCGCACTAGCGTTCTGCTGTAAC
ACGTCGTTCTCGTTCCGCGAGCTGGACGCGGCTGCA
185936
185937
GCTTCAACCGCACTAGCGTTCTGCTGTAAC
GCGGCGAACTCCGGCAGCTCCGTAGACTCACTCTC
186001
186002
GCTTCAACCGCACTAGCGTTCTGCTGTAAC
GCTCCTCGAGTTCATTCAATGCGCGGTAAAGGGTA
186066
186067
GCTTCAACCGCACTAGCGTTCTGCTGTAAC
GCCACGACCGAGCCCCTTAGTCCTACCTTCGGAGAA
186132
186133
GCTTCAACCGCACTAGCGTTCTGCTGTAAC
ACGCCGATGGTTTCCGGCTTCGCAGGCAGGTACTT
186197
186198
GCTTCAACCGCACTAGCGTTCTGCTGTAAC
GGCTGATTATAGCCGGATGTTTTTAGTCGGTACAG
186262
186263
GCTTCAACCGCACTAGCGTTCTGCTGTAAC
TGCGGTTCTCCTGGGCGTCGCTCGACCGTAGCCAT
186327
186328
GCTTCAACCGCACTAGCGTTCTGCTGTAAC
CTTCGATTTCGTTTTCCCCATCGTCTGCCGTAACGC
186393
186394
GCTTCAACCGCACTAGCGTTCTGCTGTAAC
ACGCGCCGGACTGAGGACGGCGCGCATCATCGCGGC
186459
186460
GCTTCAACCGCACTAGCGTTCTGCTGTAAC
ACCGCCATCGAGCCTGCCCTTGAGCGCGTATACCTC
186525
186526
GCTTCAACCGCACTAGCGTTCTGCTGTAAC
GAGGCGAGGCAGTGGTTCTCGGACTTCAACCTCATCCC
186593
186594
GCTTCAACCGCACTAGCGTTCTGCTGTAAC
CGCCGGACGTCCAGATCGCGCCGGATGGCGTCCTCCC
186660
186661
GCTTCAACCGCACTAGCGTTCTGCTGTAAC
GCGATGGCCTTCGAGACGGTCGGCCCCGACCTCCC
186725
186726
GCTTCAACCGCACTAGCGTTCTGCTGTAAC
CGCGGACACGCCGCAATATACCTCCGACGTCATC
186789
186790
GCTTCAACCGCACTAGCGTTCTGCTGTAAC
TCGACGCGCCCCAGCTCCGCGCGTCGGGCGAGGGCTAC
186857
186858
GCTTCAACCGCACTAGCGTTCTGCTGTAAC
AAGGGGTGTCCGCGTATACGGTTAGGTAGAGGTT
186921
186922
GCTTCAACCGCACTAGCGTTCTGCTGTAAC
GAGTTGCTGGTACTCCGATTTCACCTGTTGCTTCCG
186987
186988
GCTTCAACCGCACTAGCGTTCTGCTGTAAC
TACAGTCCGTTTCACCGATACCATTCACGTTCGACC
187053
187054
GCTTCAACCGCACTAGCGTTCTGCTGTAAC
GACGTCGAGCAGCGCATGAGCCAGCTCGGCGACGC
187118
187119
GCTTCAACCGCACTAGCGTTCTGCTGTAAC
TGATTTGGGAACTCCAATACTCTGAGAGCGTTGGGTT
187185
187186
GCTTCAACCGCACTAGCGTTCTGCTGTAAC
CTCTGGTAGAGCGCCGAGTGGATATTCGAGGAGTC
187250
187251
GCTTCAACCGCACTAGCGTTCTGCTGTAAC
GCCCACGGAACTCAACACGCGTCCCACGCATCTCCT
187316
187317
GCTTCAACCGCACTAGCGTTCTGCTGTAAC
AGGGGCCGCTGCGCGTGTCCAGCGGGCAGGTCCT
187380
187381
GCTTCAACCGCACTAGCGTTCTGCTGTAAC
GAGTCTCCCTCCCACGCCTCGCGAGCCGCCCGGAGCGTCCCCGGGCC
187457
187458
GCTTCAACCGCACTAGCGTTCTGCTGTAAC
CTCGCGGTCGACATCGAGGACGGCGTGATTCCC
187520
187521
GCTTCAACCGCACTAGCGTTCTGCTGTAAC
TACCCTCGTCAGTGTCCACAACACCCGACCAGCCGTT
187587
187588
GCTTCAACCGCACTAGCGTTCTGCTGTAAC
GTGGGCACGGTGACGTCGACGTCGCCCCGGCCGAACC
187654
187655
GCTTCAACCGCACTAGCGTTCTGCTGTAAC
TTCGCCGCGACCCATTCGGCTTGTAGTAGGTCGCG
187719
187720
GCTTCAACCGCACTAGCGTTCTGCTGTAAC
CGGGCGTCGTCTCCTACGCGCTCAGTCACACGG
187782
187783
GCTTCAACCGCACTAGCGTTCTGCTGTAAC
AGTTCAAGCGACGGTTGCCCGGAGTCGTTCGGTTCCGT
187850
187851
GCTTCAACCGCACTAGCGTTCTGCTGTAAC
GAGACGGTCTTCGTCACCGCGTCACCGCCCGCGCGCT
187917
187918
GCTTCAACCGCACTAGCGTTCTGCTGTAAC
CACAACGACTCCCTCACGAACGCCAGCCTCGGATAG
187983
187984
GCTTCAACCGCACTAGCGTTCTGCTGTAAC
TGCGGAGGCGTCCGCGTCGGATACCGCCAGCGTT
188047
188048
GCTTCAACCGCACTAGCGTTCTGCTGTAAC
GCCAGCGAAACGGCTAGCCACTACTGGACTGCCGT
188112
188113
GCTTCAACCGCACTAGCGTTCTGCTGTAAC
GGCCGGCGAAGCCATCCTGATGCCGCCGAATCACGTC
188179
188180
GCTTCAACCGCACTAGCGTTCTGCTGTAAC
GCGTGGATTCGGCGAGGTCCTCGTCGAGGATGTC
188243
188244
GCTTCAACCGCACTAGCGTTCTGCTGTAAC
TCGAGTTCGTCGCCCGCGACGACGACGGCGACGA
188307
188308
GCTTCAACCGCACTAGCGTTCTGCTGTAAC
AATCCCCACCGCTCTTCGAGTTCTTCGCGCGCCTCGC
188374
188375
GCTTCAACCGCACTAGCGTTCTGCTGTAAC
TCCATGAACTCGTCGACGGCCTCGCTGTTGTTCGT
188439
188440
GCTTCAACCGCACTAGCGTTCTGCTGTAAC
TACGCACGGTACATCAACCGGAACCGCGTTGAGCG
188504
188505
GCTTCAACCGCACTAGCGTTCTGCTGTAAC
GTGTCCAGCGACTTCCGAATCTCCTTCGTCGTATCCT
188571
188572
GCTTCAACCGCACTAGCGTTCTGCTGTAAC
CCGCATCTGCCGCGTCGTCTCCGACATTCCCGGCGT
188637
188638
GCTTCAACCGCACTAGCGTTCTGCTGTAAC
ACACGCACTCGACGACCGCTTCCTCGGAGTGCGGCTG
188704
188705
GCTTCAACCGCACTAGCGTTCTGCTGTAAC
TTCTCACACGTCTCTGCGACGTTCAAGCGTTGGCC
188769
188770
GCTTCAACCGCACTAGCGTTCTGCTGTAAC
CACCCAGTTCACTGGGTTGTCCGACCCGTCGCGG
188833
188834
GCTTCAACCGCACTAGCGTTCTGCTGTAAC
CTCCAACAAACCACTATGGTGCGGGAGCGGGTA
188896
188897
GCTTCAACCGCACTAGCGTTCTGCTGTAAC
188926
Left flanking sequence : Till position 185156 (length
bp)
AATACTGGGGGCGAAAATGGATAGCACCGACCCAAGCAAAACCAGTCCGCTACGCGTTTGCTGCGTCTCG
CTCGGCCCCCGTCGACAGCAGTATCCTGAA
Right flanking sequence : From position 188926 (length
bp)
CATGCCCGATTAGGGGCATTCAGCGGTGCTACAGCCCAGATATACTTCGGTGTTTCCGTCGACCCTCAAT
ACTCCCTGAACCCCCGGGGGTCGATGAAGA
Print the CRISPR sequence : From position
bp To position
bp