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CRISPRs details
NZ_LT220504_6
Flanking alignement tool
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NZ_LT220504_6                                                                                                                 
top
Strain :
Lactobacillus rhamnosus GCF_900070175
RefSeq :
NZ_LT220504 (chromosome linear)
CRISPR id :
NZ_LT220504_6
DR consensus (36 bp) :
GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAAC
Number of repetitions :
25
Begin Position :
3009772
End Position :
3011392
3009772
GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAAC
TTTCAGGTATCGTAAGCGAACGTCTAGGCA
3009837
3009838
GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAAC
TCAAAAATCGGGTTCTCTCTCAGACCCTTG
3009903
3009904
GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAAC
AACAGTGACTTGGCTAACAACTTGCAGCAG
3009969
3009970
GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAAC
ACATATTTTCGTGGCCACGGTTTACCATGA
3010035
3010036
GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAAC
TTTTCATATTATCAATGACAGCATACGAAT
3010101
3010102
GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAAC
GACATATTCGCGGCAAGTGCTTCCGAATCC
3010167
3010168
GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAAC
CGCCAAACGCTGAAACAGGTGATGACAATG
3010233
3010234
GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAAC
GAGCAAAACATTAAAAACATGCAAGGCGAT
3010299
3010300
GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAAC
AGTGTTTGCTGATTACTTGGATACCCTCGCC
3010366
3010367
GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAAC
CATTTTGGCTATTTTGAAGATGGCACCACG
3010432
3010433
GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAAC
TCAAAAGAGGAAGTGAAGCAGCGCTATCTC
3010498
3010499
GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAAC
GATCACCATTTGGCTTGCGAACAACCTTAT
3010564
3010565
GTCTCAGTTAGATGTCAGATCAATCAGTTCAAGAAC
GCTCATGCGCTCCAGAAAAGGTCTTATTGA
3010630
3010631
GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAAC
GTGACGTTTATTCTAGGGGCGCGCGGTGTG
3010696
3010697
GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAAC
TCTTGCAACTTGACAAACAACTCTACCAGG
3010762
3010763
GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAAC
TATTGACGTTGAGCCTAACCTTGTCAGACA
3010828
3010829
GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAAC
AAGTCATCAGTGTTTGGACTGTTCCTTACA
3010894
3010895
GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAAC
TTTGACCCTGCGTCCCGTGTATTTTGTTCC
3010960
3010961
GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAAC
AAAGTTGGCGGCATACGTTCAAGCAACAAG
3011026
3011027
GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAAC
AAATTGCCCGACTTGCTGCGCCGTCTAACT
3011092
3011093
GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAAC
TTGATCGGTTGCCACTGTGCGGGGTCATTG
3011158
3011159
GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAAC
AATTGCAGTGACAATGATCGTTGCATTGCT
3011224
3011225
GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAAC
GCAACTTGTGACCAGCCCCATCTGCTTGCG
3011290
3011291
GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAAC
GAAAAATGGCGCAAGATTGTCGATCAAGAG
3011356
3011357
GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAAC
3011392
Left flanking sequence : Till position 3009772 (length
bp)
AACGCAGAAAGTTTTTTGAGAAGTGCCAGTATATCTATATTGACAGAGATTTTATGGATAGCCGAGAACT
GATTGATTAAGAGCCTGTGTGAAAACACCG
Right flanking sequence : From position 3011392 (length
bp)
TTCACTCTCTTCCATGTTCTAAAGTGTAGAGTCTCAGGCAAATATCAGATCAAAAAACACCTTCAGTGAA
GACGCTCCTCATAAATGCTATGCAAATCCC
Print the CRISPR sequence : From position
bp To position
bp