Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_LT629973_1                                                                                                                 top


Strain : Akkermansia glycaniphila GCF_900097105 RefSeq :NZ_LT629973 (chromosome circular)
CRISPR id : NZ_LT629973_1
DR consensus (33 bp) : GTCGCACTCCTCACGGAGTGCGTGGATTGAAACNumber of repetitions :17
Begin Position : 1786706 End Position : 1787812

1786706GTCGCACTCCTCACGGAGTGCGTGAATTGAAACATCAGCCTTGCCGCCGGTTCCAATATCGTGAAAA1786772
1786773GTCGCACTCCTCACGGAGTGCGTGAATTGAAACATTGAACATGACGGAAAGCGTCTCCCTGTATCTG1786839
1786840GTCGCACTCCTCACGGAGTGCGTGAATTGAAACAACAGGGGGAAGCAGCAAGCCGCTGAGCGAAGGG1786906
1786907GTCGCACTCCTCACGGAGTGCGTGAATTGAAACTAGATTCCGGGGTGACGCGGGCGGAAGCGATGA1786972
1786973GTCGCACTCCTCACGGAGTGCGTGAATTGAAACTCAAAACAAGAAGTCATTGACATGAAGGCGATGAAC1787041
1787042GTCGCACTCCTCACGGAGTGCGTGAATTGAAACCCTCCCTTACCTCGCCTCCCCGCAGCCTGAAAAT1787108
1787109GTCGCACTCCTCACGGAGTGCGTGAATTGAAACTCCACAATCAGCACCGTGCCGCGTGGGCTATATC1787175
1787176GTCGCACTCCTCACGGAGTGCGTGAATTGAAACTCATCTCGGCTACATCACATGAGGAAATTGGCATG1787243
1787244GTCGCACTCCTCACGGAGTGCGTGGATTGAAACCGGCGGCGATGGGTTCCGGGTCGCCGGGGATGGT1787310
1787311GTCGCACTCCTCACGGAGTGCGTGGATTGAAACTGCTGGCCATGCGCATCTCCTGCGTCGAGTAGAT1787377
1787378GTCGCACTCCTCACGGAGTGCGTGGATTGAAACTTGCCGTCAGATTCCCTCTTCACCCTCGCCGCAT1787444
1787445GTCGCACTCCTCACGGAGTGCGTGGATTGAAACATCGGAAGCCCGCCTGTCGTGTCGAATAATAGGGG1787512
1787513GTCGCACTCCTCACGGAGTGCGTGGATTGAAACCTTCATCCCTGCCCGGCACTCCGCCACGGGCAAG1787579
1787580GTCGCACTCCTCACGGAGTGCGTGGATTGAAACGCAGGGGATGCCGCTGTCCATATCCGGGTACCAT1787646
1787647GTCGCACTCCTCACGGAGTGCGTGGATTGAAACTGGCATGCTTCGCCAGCATTTTTTGCTCGATCGG1787713
1787714GTCGCACTCCTCACGGAGTGCGTGGATTGAAACCCTCCGTTCATGAGGGTGCAGACCGGCGATAAG1787779
1787780GTCGCACTCCCCACGGAGTGCGGCGGGAGATGT1787812
Left flanking sequence : Till position 1786706 (length bp)
ACTGGCGCGGGTGCAATCGTCTGCTTTTCGGCAGTACGTCAGCAAGTCCGCGCAAATGCAAGCATGGACA
AGGCTTTATCAATGTGTTATGGTCTTGGCT
Right flanking sequence : From position 1787812 (length bp)
TTCTACCTCAGGCCATTTCTTCGTCATGGATGCCGCTTTTCATTTTGCGGCGGAAGAACCATGACAGGGT
GATCCATGCTACGGCGGAGGAGATGAGGTC
Print the CRISPR sequence : From position bp To position bp