Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_LT706985_5                                                                                                                 top


Strain : Propionimicrobium sp. Marseille-P3275 GCF_900155645 RefSeq :NZ_LT706985 (chromosome linear)
CRISPR id : NZ_LT706985_5
DR consensus (36 bp) : GAAGTCTATCAAAGGGAAGTAGAACTGATTCCCAGCNumber of repetitions :11
Begin Position : 1789546 End Position : 1790221

1789546GAAGTCTATCAAAGGGAAGTAGAACTGATTCCCAGCTTAAAATAGTCTGCCGCTGCCCGGTTTA1789609
1789610GAAGTCTATCAAAGGGAAGTAGAACTGATTCCCAGCCCTTTTCGCGAGTTACCGTCTGTCCAAG1789673
1789674GAAGTCTATCAAAGGGAAGTAGAACTGATTCCCAGCTACCACTGCCGGGTCGTCGAGCGGATCA1789737
1789738GAAGTCTATCAAAGGGAAGTAGAACTGATTCCCAGCGTAATCGGCGCATCGAGATCGAGGGTGA1789801
1789802GAAGTCTATCAAAGGGAAGTAGAACTGATTCCCAGCAGTCTGCTGGTTGGCGGGCGGTGTTTGC1789865
1789866GAAGTCTATCAAAGGGAAGTAGAACTGATTCCCAGCCAAGGTCTAGACCCCGCTGCCAATTGGA1789929
1789930GAAGTCTATCAAAGGGAAGTAGAACTGATTCCCAGCGGGGTGTGGAGGTGCCGAACGTGGCGCG1789993
1789994GAAGTCTATCAAAGGGAAGTAGAACTGATTCCCAGCCCCATCTCGCCATTCAGGGGCAAACGCG1790057
1790058GAAGTCTATCAAAGGGAAGTAGAACTGATTCCCAGCGCGGATTGGCTAGAGGAACGCTGCCAGC1790121
1790122GAAGTCTATCAAAGGGAAGTAGAACTGATTCCCAGCTTGGGCGTGAGTGCATAGGGCTTCATGA1790185
1790186GAAGTCTATCAAAGGGAAGTAGAACTGATTCCCAGC1790221
Left flanking sequence : Till position 1789546 (length bp)
CAACCGAGATACCTAACTCAACTGAACCAACACAGCTACTGCTTTTTTAACGAAAAAACGCCGATATCTC
GGTGTTGCCAAGGGGAAATTACTTCCCTCT
Right flanking sequence : From position 1790221 (length bp)
GGCAAAAGATGAGCGACATGCTATGGTCAGGCGCCCAGAAGGTGAGTCCGCCTAACCAGTTCCGTAAACT
CTAGTACCAGTTGAACTGGTAGGAGTGGTC
Print the CRISPR sequence : From position bp To position bp