Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_000918_5                                                                                                                 top


Strain : Aquifex aeolicus VF5 RefSeq :NC_000918 (chromosome circular)
CRISPR id : NC_000918_5
DR consensus (29 bp) : GTCGCAATCCCTCACTATTAGGGCGTAACNumber of repetitions :3
Begin Position : 692063 End Position : 692223

692063GGAACAATCCCTTATTGTTAGGGCGTAACTGACACCAGCAGGTCCTATCACAAGTCCCATCAAAAG 692128
692129GTCGCAATCCCTCACTATTAGGGCGTAACCGGTCCAAGTTGTTCCATCAGAAGAAACAGAAATGGT 692194
692195GTCGCAATCCCTCACTATTAGGGCGTAAC692223
Left flanking sequence : Till position 692063 (length bp)
AGTTTTCCCGAAATCCCTCAAAAATTCCATATAAATACTTTAAAGCTAAATCTGGATAAGAAAAGTTATG
CGAGAAAGAGAAACGATAGCGTATTTCCAA
Right flanking sequence : From position 692223 (length bp)
CCTGCGTGCCTGTGTCTAAAAAATAACGCTTTATCAACAACTTATTAGACACCCGATCCTCCCGAAACGA
ATGTTAATTTCCGCTAACCCGAGGTTCCGC
Print the CRISPR sequence : From position bp To position bp