Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_007644_1                                                                                                                 top


Strain : Moorella thermoacetica ATCC 39073 RefSeq :NC_007644 (chromosome circular)
CRISPR id : NC_007644_1
DR consensus (37 bp) : GTTTCAACCCTCGCCCGGCATGGAAGCCGGGCGCGACNumber of repetitions :24
Begin Position : 505882 End Position : 507573

505882GTTTCAACCCTCGCCCGGCATGGAAGCCGGGCGCGACGCTATGGATTTTGAGTCTGCCATGGCTGATGTTAG 505953
505954GTTTCAACCCTCGCCCGGCATGGAAGCCGGGCGCGACGGCTGGTCAAAGTAAACCCCTCCGGCACTTCGCAG 506025
506026GTTTCAACCCTCGCCCGGCATGGAAGCCGGGCGCGACGTGCACAACAAAGCGGCAGAGATGGGGCTTAAACG 506097
506098GTTTCAACCCTCGCCCGGCATGGAAGCCGGGCGCGACTGATTTATCCTGTGCCCTTGGAAGAGACACAAAAG 506169
506170GTTTCAACCCTCGCCCGGCATGGAAGCCGGGCGCGACGTATTAGCGCTGATGTCGCTATCAAGGCCCTTGTG 506241
506242GTTTCAACCCTCGCCCGGCATGGAAGCCGGGCGCGACATGAGATTTTTGTTTTGCGTTTCCTGCGCGACCAGG 506314
506315GTTTCAACCCTCGCCCGGCATGGAAGCCGGGCGCGACGATTCTGTTGGATGGCAAAGCTTACTTAGTGGTT 506385
506386GTTTCAACCCTCGCCCGGCATGGAAGCCGGGCGCGACTAGGCCCTCCAGGTAGCCGTTAATGGCAGCGCAGA 506457
506458GTTTCAACCCTCGCCCGGCATGGAAGCCGGGCGCGACGCCCACGAGGTTTATGAAAATGATTATTTTGTGCT 506529
506530GTTTCAACCCTCGCCCGGCATGGAAGCCGGGCGCGACTTGACGGCCTGAACCCCCATATGGCCGTGATCGAT 506601
506602GTTTCAACCCTCGCCCGGCATGGAAGCCGGGCGCGACGTCATTGGCGAGTCAGGACAGGTATATGTAGACATT 506674
506675GTTTCAACCCTCGCCCGGCATGGAAGCCGGGCGCGACGACCGAATTTCGGCTCCGCTGCGGACTATAGAAA 506745
506746GTTTCAACCCTCGCCCGGCATGGAAGCCGGGCGCGACGACAATAGGCAGCATATGCCCCCGTATTCGGATTCG 506818
506819GTTTCAACCCTCGCCCGGCATGGAAGCCGGGCGCGACGGCTATTTGGCAAAACGATTGAGATGATACAAGAT 506890
506891GTTTCAACCCTCGCCCGGCATGGAAGCCGGGCGCGACGACCTTCCGGTGGTCCTCTAGCTTCCGGCCCTGCA 506962
506963GTTTCAACCCTCGCCCGGCATGGAAGCCGGGCGCGACTTGCGTATCAGACGAAGGGTTAAAAGCACCGTCA 507033
507034GTTTCAACCCTCGCCCGGCATGGAAGCCGGGCGCGACTTTCGGCTTCGGGGCCTTATATTCCTTGCCATCCA 507105
507106GTTTCAACCCTCGCCCGGCATGGAAGCCGGGCGCGACGTAGATCCATATCCGATCAAGTCCAAGAATATGTT 507177
507178GTTTCAACCCTCGCCCGGCATGGAAGCCGGGCGCGACGCACCTTCACCTGCTTAAATTATACCACATTTCCA 507249
507250GTTTCAACCCTCGCCCGGCATGGAAGCCGGGCGCGACATTTGTTCGCCATTTGAAAGAGTGGCGAACGAGT 507320
507321GTTTCAACCCTCGCCCGGCATGGAAGCCGGGCGCGACCTCTCGCCCGAAAAAAATCCTCAAAAAATTTTTCG 507392
507393GTTTCAACCCTCGCCCGGCATGGAAGCCGGGCGCGACATTAGACGGTCTTACCAAAGGTCTAATCAGGACAG 507464
507465GTTTCAACCCTCGCCCGGCATGGAAGCCGGGCGCGACGATACGCCAGGCTGTGCAAGCCTTTCGGCTATACG 507536
507537GTTTCAACCCTCGCCCGGCATGGAAGCCGGGCGCGAC507573
Left flanking sequence : Till position 505882 (length bp)
CCGCAAATGGGTGGAGCAGGAGAGCATTGCGATCAATGTAAGCTGGGCGTAATAGCCGGGCATAACTCAT
CTACCCAAGCTACGCCGTTGATGCCGTCCT
Right flanking sequence : From position 507573 (length bp)
ACTTCGCGCTAAAACCCTTGGCGGACAACCCCTATATTACTACTCTGCGCGAACCTGATGACTAAATTAG
AATACTTCATTATGCTTCACCTCTAAAATT
Print the CRISPR sequence : From position bp To position bp