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CRISPRs details
NC_009437_3
Flanking alignement tool
Page manual
  
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NC_009437_3                                                                                                                 
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Strain :
Caldicellulosiruptor saccharolyticus DSM 8903
RefSeq :
NC_009437 (chromosome circular)
CRISPR id :
NC_009437_3
DR consensus (30 bp) :
GTTTCAATCCCCAAAGGGAAGGCTACAAAC
Number of repetitions :
30
Begin Position :
60110
End Position :
62054
60110
TTTTTAATCTTCAAAGGGTAGGCTACAAAC
CAATGGTTTCCACAGAATTCAAGCACTTGTTGATATCAA
60178
60179
GTTTCAATTCCCAAAGGGGAGGCTACAAAC
TATCAAAGCAAATGCAAATATGGGTGATGAGCAAA
60243
60244
TTTTCAATCCCCAAAGGGAAGGCTACAAAC
TTGCTGTGTCAAACCACGTTCTTTTCTCAATTCTTT
60309
60310
GTTTCAATCCCCAAAGGGAAGGCTACAAAC
AAGGAAGGCTAAAGGACTTACACAAGAAGAGATGGC
60375
60376
GTTTCAATCCCCAAAGGGAAGGCTACAAAC
CTGCAAAAGCTTATTCGCTATCGTCTGTGCCATAGC
60441
60442
GTTTCAATCCCCAAAGGGAAGGCTACAAAC
TGTTGCGCTTCGCCTGTAGAGCTCCAGCTTCGCCTG
60507
60508
GTTTCAATCCCCAAAGGGAAGGCTACAAAC
CCGTTGGGGTTGAAAAAATAAAAAAAAGGGAGGGTT
60573
60574
GTTTCAATCCCCAAAGGGAAGGCTACAAAC
CAGAAATAATAAGTACACTATAGCGGTTGATATCG
60638
60639
GTTTCAATCCCCAAAGGGAAGGCTACAAAC
AGAGGAAGATGAAAGCAATTTTGGTTGATGAAAACA
60704
60705
GTTTCAATCCCCAAAGGGAAGGCTACAAAC
CGTTATGATAGCGCTCTCTATAAAAGACAGTTGAAGA
60771
60772
GTTTCAATCCCCAAAGGGAAGGCTACAAAC
CGGTAAAAAGGGTGACAAAGAGATATTGCACATGCG
60837
60838
GTTTCAATCCCCAAAGGGAAGGCTACAAAC
AACAGTTCATACAACCACCCTCCATTTTTATTTTTT
60903
60904
GTTTCAATCCCCAAAGGGAAGGCTACAAAC
TATGGAGTAGGGGCAAGCCCTACTCCTCTACCTCAA
60969
60970
GTTTCAATCCCCAAAGGGAAGGCTACAAAC
CAGATATAATTTTTAAAATTTCTTCTCGCATTTCAT
61035
61036
GTTTCAATCCCCAAAGGGAAGGCTACAAAC
TAACTCTTGTGTAATTTGTATCGCACCCCATCTGT
61100
61101
GTTTCAATCCCCAAAGGGAAGGCTACAAAC
TGTAACTGCCTCACTTGTCTGTATGCCGTTTTTAGT
61166
61167
GTTTCAATCCCCAAAGGGAAGGCTACAAAC
AAGGAATACTTGAGCAGCATAGGGCTTGACCCAAGA
61232
61233
GTTTCAATCCCCAAAGGGAAGGCTACAAAC
GCATTGTAGGAAGTGATGCAGGTACTAGCTTGAAGT
61298
61299
GTTTCAATCCCCAAAGGGAAGGCTACAAAC
TTTGACAGTGCTATCACAGCGTATCCTTCTGCTTGA
61364
61365
GTTTCAATCCCCAAAGGGAAGGCTACAAAC
TCAAAATCAACAAGAGCGATATGACGATTACTTGCAT
61431
61432
GTTTCAATCCCCAAAGGGAAGGCTACAAAC
TTTCTTAGAAAGCTTTTTTTCCTTTCTGAAATTTTC
61497
61498
GTTTCAATCCCCAAAGGGAAGGCTACAAAC
TTTGCCTTACCTGTTACTTCAGCTTTTTCTAAAAACT
61564
61565
GTTTCAATCCCCAAAGGGAAGGCTACAAAC
TTATAAGAATTTCACAATCTAACAATCGCTTCAAGT
61630
61631
GTTTCAATCCCCAAAGGGAAGGCTACAAAC
CAGTCATCTTAAATCATCCTCCTCACTTTGATTTTC
61696
61697
GTTTCAATCCCCAAAGGGAAGGCTACAAAC
TTTTTTAATCAACTCATCCAAATGATTGTATCCAA
61761
61762
GTTTCAATCCCCAAAGGGAAGGCTACAAAC
CAGTCATCTTAAATCATCCTCCTCACTTTGATTTTC
61827
61828
GTTTCAATCCCCAAAGGGAAGGCTACAAAC
TTTTTTAATCAACTCATCCAAATGATTGTATCCAA
61892
61893
GTTTCAATCCCCAAAGGGAAGGCTACAAAC
TGACGTTGAATTTGATATTTTCTTTAATAAGAAAGA
61958
61959
GTTTCAATCCCCAAAGGGAAGGCTACAAAC
ATAGCACTGCCCAGAGTCCCTGACTCATTGCAAGTT
62024
62025
GTTTCAATCCCCAAAGGGAAGGCTACAAAC
62054
Left flanking sequence : Till position 60110 (length
bp)
TTTCAGAACAAAATTCTACACTCTGTAGCCAAAGATGTTGAGTTTGTTTTATTTTTTGTCCAATTTAATT
ATACCACAAAAGCGGTCTCACAGTTTCATT
Right flanking sequence : From position 62054 (length
bp)
CCGTAGATGGCTTGAGAAATCTTACAAGGAACAAATGGTTAAGTTTTCAAGCTGCTGTAGGTTATTTCTA
TTATACTCCACAAGCTCTTGAAAGTCAACA
Print the CRISPR sequence : From position
bp To position
bp