Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_011126_4                                                                                                                 top


Strain : Hydrogenobaculum sp. Y04AAS1 RefSeq :NC_011126 (chromosome circular)
CRISPR id : NC_011126_4
DR consensus (30 bp) : GTTTTGTTTGTACCTATAGGGGATTGAAACNumber of repetitions :30
Begin Position : 1037710 End Position : 1039665

1037710GTTTTGTTTGTACCTATAGGGGATTGAAACTTTACTTAGGGATAGTGATGATACAGTATATAGTAA 1037775
1037776GTTTTGTTTGTACCTATAGGGGATTGAAACTTTACTTAGGGATAGTGATGATACAGTATATAGTAA 1037841
1037842GTTTTGTTTGTACCTATAGGGGATTGAAACTTTACTTAGGGATAGTGATGATACAGTATATAGTAA 1037907
1037908GTTTTGTTTGTACCTATAGGGGATTGAAACGTAAAGCTTATATACGCTACTTGTCCTGGCTGCAGT 1037973
1037974GTTTTGTTTGTACCTATAGGGGATTGAAACTTTATCGCTTGATTTTCAAAGCAAACGGCAGATATGT 1038040
1038041GTTTTGTTTGTACCTATAGGGGATTGAAACGCTTCTACATCATTGCCAGACACAATTAAATCTG 1038104
1038105GTTTTGTTTGTACCTATAGGGGATTGAAACAGATCAAAGCACGATCTCTGTCTGGGAGAACGAGGA 1038170
1038171GTTTTGTTTGTACCTATAGGGGATTGAAACTCAAATACTGGATAGACATGGAAATCCAGATACAAA 1038236
1038237GTTTTGTTTGTACCTATAGGGGATTGAAACTCAGCCAGTATTCGTTGTTTTTCAACCATACTGTGA 1038302
1038303GTTTTGTTTGTACCTATAGGGGATTGAAACAAACATTAAACACACTATAAAACTGTCTACCTACTC 1038368
1038369GTTTTGTTTGTACCTATAGGGGATTGAAACTAAACCAACCGTTGAATTTTAACGTCGTAATACCAGC 1038435
1038436GTTTTGTTTGTACCTATAGGGGATTGAAACTAATATCAACGCCACGCTCTCGTGGTGATATATTTG 1038501
1038502GTTTTGTTTGTACCTATAGGGGATTGAAACTTACGAGCGAAAGCTCTTGCAATTTATCAGACAAAAT 1038568
1038569GTTTTGTTTGTACCTATAGGGGATTGAAACTAAAAATCACAAAACCAATTTGGACTGCTAACAACTGG 1038636
1038637GTTTTGTTTGTACCTATAGGGGATTGAAACTCGTTCTGTACGAAGATGTATTTAATTGTCCACCA 1038701
1038702GTTTTGTTTGTACCTATAGGGGATTGAAACAGACAATACAAAGACAAAGTACCAGCCATAGAGGTGC 1038768
1038769GTTTTGTTTGTACCTATAGGGGATTGAAACAACAAATTTGGTATGGACACGTCATGCCATATGTGGC 1038835
1038836GTTTTGTTTGTACCTATAGGGGATTGAAACGGAATTATCTCCCGAATCTCAAAGGCAAATCAGACAG 1038902
1038903GTTTTGTTTGTACCTATAGGGGATTGAAACACTTTAGGGTCATATTTTCAAAGCCTGTAGTTTTTA 1038968
1038969GTTTTGTTTGTACCTATAGGGGATTGAAACTCTGTCCAGCGACGTATCCATTCCCTATGGAGCCTG 1039034
1039035GTTTTGTTTGTACCTATAGGGGATTGAAACACATTCACCACCTGGAATGGTTGGATCACCAAAACAGA 1039102
1039103GTTTTGTTTGTACCTATAGGGGATTGAAACAATATTCGTCCAAATATGAACTATAACATACATAAT 1039168
1039169GTTTTGTTTGTACCTATAGGGGATTGAAACTTGATTTGTTTGCAGGAATAGGCGGTATAAGAATAGC 1039235
1039236GTTTTGTTTGTACCTATAGGGGATTGAAACGATATAGGGACTACTCAATCAGGCTCAATAGTAGCAAA 1039303
1039304GTTTTGTTTGTACCTATAGGGGATTGAAACGAAGTATTACACGAAGGTAAAGATGATGAAAAAGCC 1039369
1039370GTTTTGTTTGTACCTATAGGGGATTGAAACGATAATGATTTAGAACATATTGTATTTTTCAATTCTT 1039436
1039437GTTTTGTTTGTACCTATAGGGGATTGAAACTACAACGTTACTAGTGATAACAGTAACAATACATAGC 1039503
1039504GTTTTGTTTGTACCTATAGGGGATTGAAACACCAGAAGTTGTTTGCTGGCTCAACTAAGAGTTTGAG 1039570
1039571GTTTTGTTTGTACCTATAGGGGATTGAAACAAGTTATTTCTGTTTATTTCAAACTTGAGACTATA 1039635
1039636CTTTTGTTTGTACCTATAGGGGATTTACTT1039665
Left flanking sequence : Till position 1037710 (length bp)
GAAATATGTTATATTATAAGCTGTTGATAGGTTGATGAGATACCTCAAAAACCTTGCCGGCAAAGGGTTT
TAGGGTATTTCACAATTTTTTCATTTTGGG
Right flanking sequence : From position 1039665 (length bp)
TTGTAAATAATGTTAGTAGTAGCAATTTCTGGTTTCATCTGAGCCGTCTGGGTTAAGAAGCTGTGAAATC
ATATCCTTTAAATACTTTTGATTTGTAGTA
Print the CRISPR sequence : From position bp To position bp