CRISPR details
Home
About CRISPRs
News
FAQs
Help
Contact Us
Examples
IGM
Navigation
Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison
Other Tools
CRISPRcompar
CRISPRtionary
CRISPRfinder
GPMS Links
GPMS Team
Tandem Repeats DB
MLVA Web Service
CRISPRs details
NC_011297_3
Flanking alignement tool
Page manual
  
Home Page
NC_011297_3                                                                                                                 
top
Strain :
Dictyoglomus thermophilum H-6-12
RefSeq :
NC_011297 (chromosome circular)
CRISPR id :
NC_011297_3
DR consensus (30 bp) :
GTTTGTAGCGTGCCTATAAGGGATTGAAAC
Number of repetitions :
68
Begin Position :
178426
End Position :
182925
178426
AATTGTAGCTTTCCTATGAGGGTATTAAAA
CAAATTTTGTAGCGTTTATGTAGTGTTAACGG
178487
178488
GTTTGTAGCGTGCCTATAAGGGATTGAAAC
CTGTGAGGTGAAAAGATGATAAATACAAAGCTTTTTAA
178555
178556
GTTTGTAGCGTGCCTATAAGGGATTGAAAC
TTTGTCATTGCTATCCCTCCTTTCGATGAAATAATC
178621
178622
GTTTGTAGCGTGCCTATAAGGGATTGAAAC
TATAAAATGAAATAATCAAGAATAGTTTCTGTTTCTT
178688
178689
GTTTGTAGCGTGCCTATAAGGGATTGAAAC
ATGTTGTCTATTTTTTGCTCTAGCTCGTCCAGCTTCCC
178756
178757
GTTTGTAGCGTGCCTATAAGGGATTGAAAC
CAAAGTGAAACAGAGAAATATAAAGCTGAAAAAGAAGC
178824
178825
GTTTGTAGCGTGCCTATAAGGGATTGAAAC
TCCTCTACACCTCTCTCCCCTACAAGAATGTCTGGAA
178891
178892
GTTTGTAGCGTGCCTATAAGGGATTGAAAC
TTGTATCGCCTCCCATCCTTAGTTTTGCTCAGTTTTA
178958
178959
GTTTGTAGCGTGCCTATAAGGGATTGAAAC
CCCCATCCTCTTCTACATCCACAACAAGTTTGCCAA
179024
179025
GTTTGTAGCGTGCCTATAAGGGATTGAAAC
AACATTAGCATTAATAAAATCTTAGCCACTTGGCCCC
179091
179092
GTTTGTAGCGTGCCTATAAGGGATTGAAAC
CTTCGAAGGTTTGTTGCAAAAAACTGAAGGAAGCTG
179157
179158
GTTTGTAGCGTGCCTATAAGGGATTGAAAC
AGCTAAAATTTGAAGAAATAGTTGGAGAATTAATTA
179223
179224
GTTTGTAGCGTGCCTATAAGGGATTGAAAC
GAATTCACCATTCTATTCACTGTTTTTCTCTACCTCC
179290
179291
GTTTGTAGCGTGCCTATAAGGGATTGAAAC
ATTGGAGGTAGAGTTTGAAGTAAGTAGAGACAAGGTGA
179358
179359
GTTTGTAGCGTGCCTATAAGGGATTGAAAC
ACTGATCCAATTCTCTCTCTCTTCTTACTATCATC
179423
179424
GTTTGTAGCGTGCCTATAAGGGATTGAAAC
TTGCGTCTGAGACAATTGGTAAAACATTCTGAGCAA
179489
179490
GTTTGTAGCGTGCCTATAAGGGATTGAAAC
GGTACAGTTAGGAATGAATATGCAAGGCACTTTTAAC
179556
179557
GTTTGTAGCGTGCCTATAAGGGATTGAAAC
ATTCTTCTTCCGTTATCTGCTCGAATATTTTTTGTA
179622
179623
GTTTGTAGCGTGCCTATAAGGGATTGAAAC
GGATGGATGCAGGTAAATTTCTAATTGTAGGCTTTAAA
179690
179691
GTTTGTAGCGTGCCTATAAGGGATTGAAAC
TCCGTGTGTACAAAAGATTGTGTAGCCTATTCTTTT
179756
179757
GTTTGTAGCGTGCCTATAAGGGATTGAAAC
TTTTGGAGAACCAAAAAGAGCTAAAACATATGATTG
179822
179823
GTTTGTAGCGTGCCTATAAGGGATTGAAAC
CTTCTATAAGTTCTTTAATTGCTTCCTTAATCTCTT
179888
179889
GTTTGTAGCGTGCCTATAAGGGATTGAAAC
TTGCGTCTGAGACAATTGGTAAAACATTCTGAGCAA
179954
179955
GTTTGTAGCGTGCCTATAAGGGATTGAAAC
ACCAAAAAGATGCAAAAAGCAAAAAAATGGCATGGAGC
180022
180023
GTTTGTAGCGTGCCTATAAGGGATTGAAAC
AGTTTTTCGATACGATGTCTATGCCTTCAATATCAAGCTTAAACA
180097
180098
GTTTGTAGCGTGCCTATAAGGGATTGAAAC
TTTTCCACTGACCAAACATTATATGTTAGTGGCATA
180163
180164
GTTTGTAGCGTGCCTATAAGGGATTGAAAC
CTGGTAGGACGTTAAGACTATATGAAAATCTCTTAAG
180230
180231
GTTTGTAGCGTGCCTATAAGGGATTGAAAC
GTTTGTGGCGGATAATGACCAAATTTCCATATAATTT
180297
180298
GTTTGTAGCGTGCCTATAAGGGATTGAAAC
TGCAATACAGCTTGCGAAATTAGAAGCAATTGCAAAG
180364
180365
GTTTGTAGCGTGCCTATAAGGGATTGAAAC
AGCCCTCTCCATTCTCTATCCCATTCTCCAAAATCCAA
180432
180433
GTTTGTAGCGTGCCTATAAGGGATTGAAAC
TCTCTCAGGCTGGTGGAAAAATCACAAGGAATTATC
180498
180499
GTTTGTAGCGTGCCTATAAGGGATTGAAAC
ACCTAATAGCAAACGAATATTTTGACACGCCAAGCGCT
180566
180567
GTTTGTAGCGTGCCTATAAGGGATTGAAAC
GACACTCCCAACTTTTTCCGAGTCTCAGACCTAAGAG
180633
180634
GTTTGTAGCGTGCCTATAAGGGATTGAAAC
GAGCGTGCGGTCTTAAAGTCGTCGTATATTCTCTGCA
180700
180701
GTTTGTAGCGTGCCTATAAGGGATTGAAAC
CAATACAGAAAAAGATAAACTTCAGGAGGGTAGTAA
180766
180767
GTTTGTAGCGTGCCTATAAGGGATTGAAAC
CGTCTTGCCTGTTGCTGCGCAATTAGGAGTATCTTT
180832
180833
GTTTGTAGCGTGCCTATAAGGGATTGAAAC
TTTCACACTTGGTTCTGGTGCAAGAGCGCTTTACCCA
180899
180900
GTTTGTAGCGTGCCTATAAGGGATTGAAAC
GCAGCAGAGGCAACCGCAATAATGATAGACATCGTGA
180966
180967
GTTTGTAGCGTGCCTATAAGGGATTGAAAC
GAATCTTTCTTAAGCATCTCCTCAAGGCAAATAGAGT
181033
181034
GTTTGTAGCGTGCCTATAAGGGATTGAAAC
AGTTTGAAGGAAGCTTCATCTTGTAGCCTTTTTATCT
181100
181101
GTTTGTAGCGTGCCTATAAGGGATTGAAAC
GTTTTTTAATCGCTTTTTAGCTTTCAGGTTTTTGCTT
181167
181168
GTTTGTAGCGTGCCTATAAGGGATTGAAAC
ATATTTCTATAGAAGCCCATGGATATCGCACCTCC
181232
181233
GTTTGTAGCGTGCCTATAAGGGATTGAAAC
GTTTTTCTAGGAGTTCTACAACATCGTTTGCAAACT
181298
181299
GTTTGTAGCGTGCCTATAAGGGATTGAAAC
CAGGCTCGATACTTACCCATGTTTTTATGCCTCTCTT
181365
181366
GTTTGTAGCGTGCCTATAAGGGATTGAAAC
TTTAGCTGGCAATAATCTAAACAATTTTTAAAATCT
181431
181432
GTTTGTAGCGTGCCTATAAGGGATTGAAAC
TTATCTCCCTCGCCACTGAGAATGATATCTTCCCCTC
181498
181499
GTTTGTAGCGTGCCTATAAGGGATTGAAAC
CTGGTAGGACGTTAAGACTATATGAAAATCTCTTAAG
181565
181566
GTTTGTAGCGTGCCTATAAGGGATTGAAAC
GTTTGTGGCGGATAATGACCAAATTTCCATATAATTT
181632
181633
GTTTGTAGCGTGCCTATAAGGGATTGAAAC
TGCAATACAGCTTGCGAAATTAGAAGCAATTGCAAAG
181699
181700
GTTTGTAGCGTGCCTATAAGGGATTGAAAC
ATTTTCTCTTTTCCAAAGCACGCTTTTCCAATTCACGC
181767
181768
GTTTGTAGCGTGCCTATAAGGGATTGAAAC
ATGGAAAAAAATGCAGAAGCCTCTCAAACATCTCAA
181833
181834
GTTTGTAGCGTGCCTATAAGGGATTGAAAC
GAGGTAAATATGTATACATTCCATATTTTGCTCAAG
181899
181900
GTTTGTAGCGTGCCTATAAGGGATTGAAAC
TCCTACAACGCTGTCTGCGTCCCATTCCAAAATCTC
181965
181966
GTTTGTAGCGTGCCTATAAGGGATTGAAAC
CACCACTCTATCAGTAGCTCCTTCTTGTTCTGTGGA
182031
182032
GTTTGTAGCGTGCCTATAAGGGATTGAAAC
TCCTTATTTATTATTGTATTCTTTCTTTTTATAACT
182097
182098
GTTTGTAGCGTGCCTATAAGGGATTGAAAC
ATAACATAAAGTGAAACTGAGCGAGACATCCCTGAAC
182164
182165
GTTTGTAGCGTGCCTATAAGGGATTGAAAC
AGGAGTGGGAAGAGATAGAAGATGAGTACAATATA
182229
182230
GTTTGTAGCGTGCCTATAAGGGATTGAAAC
TAGTAGAAAAGAAAGAATAAAAAGAAAGAATAAATAA
182296
182297
GTTTGTAGCGTGCCTATAAGGGATTGAAAC
CTTGCTGGAAGTGTAATGAGTTTCCCCTTAAAAACT
182362
182363
GTTTGTAGCGTGCCTATAAGGGATTGAAAC
AGGTTCCCATTCCTTTGTCTTAGTTTCGTCTACAAAG
182429
182430
GTTTGTAGCGTGCCTATAAGGGATTGAAAC
AAGGAAACGACGTAATAGAGCTAAGAAAATTTGAGA
182495
182496
GTTTGTAGCGTGCCTATAAGGGATTGAAAC
AAGAATGGATGTAAGAAATTTGTTTTGGAGTTGCTT
182561
182562
GTTTGTAGCGTGCCTATAAGGGATTGAAAC
AACTTACAGGAGCAAAGGGTTATAGAGGAGATGAAG
182627
182628
GTTTGTAGCGTGCCTATAAGGGATTGAAAC
AAGGAAACGACGTAATAGAGCTAAGAAAATTTGAGA
182693
182694
GTTTGTAGCGTGCCTATAAGGGATTGAAAC
AAGAATGGATGTAAGAAATTTGTTTTGGAGTTGCTT
182759
182760
GTTTGTAGCGTGCCTATAAGGGATTGAAAC
AACTTACAGGAGCAAAGGGTTATAGAGGAGATGAAG
182825
182826
GTTTGTAGCGTGCCTATAAGGGATTGAAAC
TCTCTTTCCAAGCTTCAAAAGTAATGAAATCTTTAAGATA
182895
182896
GTTTGTAGCGTGCCTATAAGGGATTGAAAG
182925
Left flanking sequence : Till position 178426 (length
bp)
ACCTCCAATAACCCCAAAACCCCGGGGGATCGACAGAAAGGTAAATTTTTGCATGAAATCCTCTTTACTA
CTTAATTTTTTTGTGATATATTATCCTTAA
Right flanking sequence : From position 182925 (length
bp)
AGATAAGATAAGCGTCTAGGCTTATTAAACCTGAAAAAGAGTCTATTTCATGCTTAGCTAAGTTCCTATA
GATTGGTTGATCGGCAAAACTTATGTAAAT
Print the CRISPR sequence : From position
bp To position
bp