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CRISPRs details
NC_011831_36
Flanking alignement tool
Page manual
  
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NC_011831_36                                                                                                                 
top
Strain :
Chloroflexus aggregans DSM 9485
RefSeq :
NC_011831 (chromosome circular)
CRISPR id :
NC_011831_36
DR consensus (37 bp) :
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC
Number of repetitions :
92
Begin Position :
4194733
End Position :
4201805
4194733
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC
TGATACCGTACGATATACGGTGTACAAGATAATGTACAAGATC
4194812
4194813
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC
CCAGATACCGGGGGCACTGTTGACCTCGAACACAAGTACC
4194889
4194890
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC
CGCGGTAGCCGTCCATTGCAAAAATGCCGTAGTGCGTCTTT
4194967
4194968
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC
TCTAGAACTCCACCAGAGCTTGCTCCGCCATGCGGATAAGC
4195045
4195046
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC
TGTACAGTATGTACACTGTACGTACACCAACAAATACTTG
4195122
4195123
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC
GAAAGAGCTACGGAACAAGCTATACTCCTTTGATATTGGTGA
4195201
4195202
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC
CCAGACTGGAAGCTGCCATCCCAAAAGCGGCAACGTTT
4195276
4195277
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC
CAATATCAAACGAGACACTGCCGACCTCCTCGTTAT
4195349
4195350
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC
CGGTTTGTACGCGACCACTCATCGAGTACTCGTTGGATAC
4195426
4195427
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC
ATGGGAGGATCGATCGCAGTCTTACTAAAACGACCCCATCC
4195504
4195505
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC
TTAAAGAAGCCGTTCTGCAGGGTACCGACCTCTATAAAG
4195580
4195581
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC
GGCAGGAACGCCGTTTACGACCGTGTACACCGACACTTC
4195656
4195657
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC
CGGTATGATCCGGCAACGAATGTATCCGTTACTGGATCGTC
4195734
4195735
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC
CGGTATTATCCATACCGTTGACAAACAGGGCATATGCCTGC
4195812
4195813
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC
TGGAGATGGCCGCACCATACAAGTGCGGCCATCTCCAG
4195887
4195888
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC
TCATATGTCCCTGCTTGCAACAAACTGCCTGACTCCGA
4195962
4195963
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC
CTGAGAGCCAGCCCTGACGTCCTTTCTCCCTCAGTGAGGCAA
4196041
4196042
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC
CACCATTCCGTCTCGCCCCCGCAACCGACGGAGCATCCCA
4196118
4196119
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC
CGACGGTTATGTCGTGGATATTAAAACGGGAAAGCGAGTAG
4196196
4196197
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC
GTAGCGCAAACGGTGGTTGGATGGGCTGCACCCATACGTCGAG
4196276
4196277
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC
TTGTGCTGGAGCGCGAGTTGGAGCAAATGTACATTCC
4196350
4196351
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC
TGATGATGTCGTCGAAGTAATCGAGTTATAAAAAAAGAAGGAGGA
4196432
4196433
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC
TCGTTTGTTAGCGATACCGTTGTCGACCAAGCAGACCAACT
4196510
4196511
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC
CGATGGTCAAGGCTCTATGTAAGGAAGTCCCTAGCGCCTTAC
4196589
4196590
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC
GTACCGCGATGCGTGGTGGTGGTTATTGCTGCTTTTTGC
4196665
4196666
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC
GCTATCATTCTTTGGAGATCACCGGCGAGCAACTCCTGCTTTT
4196745
4196746
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAG
GTATTTGTAATTGTTTTCGCTAAGCCGGAAATTGATTTAC
4196822
4196823
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAG
TTGACGAGGGCTGCACGGCTGGAAGCCGGAGTCTCTCC
4196897
4196898
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAG
CGGTTGAGGAAGTACCTCCTCATACTGTGCTCGCGTTCC
4196973
4196974
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAG
ACAGAATACCGACACACCGGTTCGACCGCTGGTGAAACCG
4197050
4197051
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAG
CGATCAGATAACAGTGTTCGGAGAGCCGGATTACCTTTGCC
4197128
4197129
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAG
TCGAAAACAGAGACCGCGTTGCTAAACGCGGTCAAGGCACTCA
4197208
4197209
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAG
AGGCGAGAGACATCGAGGTGAGGGGAACGAGTATCTGTATAC
4197287
4197288
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAG
TCATCATCAACCGCATTGCTGATTCGGATCATTGTTTGCAT
4197365
4197366
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAG
ACACACATCGCCCTTTTATACCCGCCGACACTCATTC
4197439
4197440
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAG
TTGAACACCGTCCGGTTGTTGGCGGTAGCCGTCACCGTGTC
4197517
4197518
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAG
ACTCTTCGGTTGTCAGATATGACCACGGCGGCATCATAC
4197593
4197594
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAG
CAACGTCTCTGCCACGCAGTGCGGAGATACGTCGATGTTAACA
4197673
4197674
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAG
CGCCTGCACACTAAACCCGACACCACATCCCAACATGAG
4197749
4197750
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAG
CCTTGTCAGCCGTCCATGGGTGGCTGGCCGTGGTGAGCC
4197825
4197826
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC
ATATTATCCCACTCAAGGTCAAGCAACGCCTTGTTCCA
4197900
4197901
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC
GATCAGATGAATCAACTTAAGATACTGGTGTATGCTCC
4197975
4197976
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC
GAACAAAGTCACGATTGCAGCAGACCAGAAACCTGCTGCAA
4198053
4198054
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC
ACATGCTGCTGCTCAACCGCGCAGCGGAGTATGCTGC
4198127
4198128
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC
ACACCGGCACAGCGGGTCGCACAGAACCGTCATGGGTAC
4198203
4198204
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAG
CTTCATTGCTACTGGCCACGACGTGGACGGCCTTGTCAGCCG
4198282
4198283
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAG
GTGTTACTGATCATGATTGCCGTTTGCATCGTTTTTTC
4198357
4198358
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAG
CGGCAGGACGTACCGGCAGAACGTACCGACAATACAAGAAC
4198435
4198436
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAG
TTCAACGGTGCTCGTTCTGCCCACCGTATTGCCCCTTTCG
4198512
4198513
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAG
GGAAGTACTCGGCGCGCGCCTCCATGATGGCTTCCAACGGGT
4198591
4198592
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAG
TGCAGACGCACGTCGGTGGTTGGTACGGCTTACCGTTTCTG
4198669
4198670
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAG
TACTGCACTATCCTATGCTCCTCGTGTAGACGAGAAGCACAGG
4198749
4198750
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAG
AACACCGGTGAAAAAACCCGCATGTGCGCGGTATACGTTG
4198826
4198827
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC
AATAACTTGATGAGCGTCTGGCGACGCTCATCATTGCG
4198901
4198902
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC
TGACTAATGCTGTCACGCTCGTTATCGATCACGCCGCTGTGC
4198980
4198981
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC
GAAAAATTATTGTTATCGTCGCATCCATATTATTATCG
4199055
4199056
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAG
TTAGTTGAGAGATTGGCTGCCCCGGAAGGGCGTAGTCG
4199130
4199131
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC
CCAATAAAAAAACGGTATTTACTGCTTCCATACCGGTATCCT
4199209
4199210
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC
TTATTGCCAGCCGGTCAAATTCGGCAAGCACATCTTCAAT
4199286
4199287
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC
CCGTACTTCACGGGGCGACCGACCACAAGGTCGGTTTTTG
4199363
4199364
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC
CGGCTTCTTTGTAATCGACCGATACCGATCCATCACAACATGAA
4199444
4199445
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC
ACGACACAATGTCGACGCATCCCCCACCATTACCCCGCGTG
4199522
4199523
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC
GTACGTTATCGCGTGGTTGACGGTAGGACTGTTGGTGTAC
4199599
4199600
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC
GTTTGAATAAGGGGCATCTGTAAAAAGTCCCCCAGCGCCG
4199676
4199677
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC
GAGGCATGGCAGATACTCGATAGACGGACGTTTATGAC
4199751
4199752
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC
TGAAAACAATTGACTTGACAAGTAATTTGACAAAAAAGAC
4199828
4199829
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC
CTGATCCGTTACCAGTGTCCAACCGTTGACACTGGTATTTGTCA
4199909
4199910
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC
ACCGCGATGGCGGCACTCATCGCGGTTACGATCGGTTTTTACT
4199989
4199990
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC
TTATTACGGAACAAACCATGCGTCGAAAAACCGATGTCCTGTAGAC
4200072
4200073
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC
CCCGGTCTGGGTACGCTAAGACCACAAACATTGAGACATTAT
4200151
4200152
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC
TTTATTTCTTATAGTCCTTTAGCGTCTCCCTCCAGTTTGG
4200228
4200229
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAG
ATCATAAATTGTTGTAGCGACCGGAAATATCCGGTCTAA
4200304
4200305
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC
CCGAACGTATGTTGTTGCAAGCACCTCGCTTGCCTTTGT
4200380
4200381
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC
TGTATACGCTATCGTTGCGGGTGTACCGATCACGCCTTTCG
4200458
4200459
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC
GCAAACACCCGCATATTCGCGGTATACGTTGTCATATCG
4200534
4200535
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC
TATCATGTCTCGTAATAAAAGTGATACCTGCCACCTCAAA
4200611
4200612
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC
GCTGCGTAATTATGTTGAAGTACTCGGCGCAAGCGGTATCCG
4200690
4200691
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC
CCCTGCGTTTTTTGTCACTATGTATACATCGGAGTCGGT
4200766
4200767
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC
GACTCATCAACACATAAAGATCGGGGTCTGGTGAGCGGG
4200842
4200843
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC
GCATCTTTGAGCGCCTTGACGGCGCCCAAAAGTGCCTTTT
4200919
4200920
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC
TTCCTATTCTTATCGGGTTCTACGACTTTGACCGTTTCTCC
4200997
4200998
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC
AAGAAGGCACTGGATACATTTTTACTCCAGCCGGTTAAGTTTGG
4201078
4201079
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC
CTTCTCGGTGCTCCGGTAGAGTACTTGTTACCAATGCCTCGG
4201157
4201158
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC
CTTTCTCATCGCTGGCCACAACGTGGACGGCTTTA
4201229
4201230
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC
AGATATGGCATTCGCCGTCTTGTATTGGTAACATACTTAGCC
4201308
4201309
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC
GGACGTTCTCCAAACGCGCATGAGACACAACCCATCAAC
4201384
4201385
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC
CTTGCACAATCGACTGCTCCAATGTGGCGTCTGGGTAC
4201459
4201460
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC
TAAGCTTTCGTTGACGTTGGAATATCGGTATAAGATAAC
4201535
4201536
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC
CTGCCGTCTCCGGCTCCTGCGCCGCTGCCTGTGCTAAGGCAC
4201614
4201615
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAA
TGCCGATATTGTTGCCTCCTATACACCTGGGTCGTTTGT
4201690
4201691
CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAAC
CAAACGGCAGGAACACCGTTTGCAATTGTTTGTACCGTTGC
4201768
4201769
CTTCAAAACACCAAAATCCCCGTGATTAATTTGTCGG
4201805
Left flanking sequence : Till position 4194733 (length
bp)
AACAACCGTGCAAAACGCTTAACAATTATTGCGGCACAGCCGGTCACCGCGCAAAACGGGTTATGGAGGG
CCTTGCAAAGCGGTAGACGATGTGGTACCC
Right flanking sequence : From position 4201805 (length
bp)
AACACGGCATGCCGTGTCCCGACAACCCAATGTGCCGTCTCCCGACGTGCCGTGCTGCCCACCACCACGA
CCCTCGTGACGTTGTACGGGCGACCTGGTG
Print the CRISPR sequence : From position
bp To position
bp