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CRISPRs details
NC_011880_1
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Page manual
  
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NC_011880_1                                                                                                                 
top
Strain :
Cyanothece sp. PCC 7425
RefSeq :
NC_011880 (plasmid pP742501 )
CRISPR id :
NC_011880_1
DR consensus (36 bp) :
GTCCCTACTTGTTAGGGAAATCAATTGAATGGAAAC
Number of repetitions :
88
Begin Position :
48240
End Position :
54633
48240
GTCCCTACTTGTTAGGGAAATCAATTGAATGGAAAC
AACTCTTCCGTCGCGCCACTGGGTTGGGTGAGTGGAAG
48313
48314
GTCCCTACTTGTTAGGGAAATCAATTGAATGGAAAC
CTAGTTTATAGAGTTGTTCATCTGCCAGTTGAAA
48383
48384
GTCCCTACTTGTTAGGGAAATCAATTGAATGGAAAC
GCTTCGACTCGGCAGCAGGGCATTACCGACCACTGA
48455
48456
GTCCCTACTTGTTAGGGAAATCAATTGAATGGAAAC
CTGTTCATGCTCCTTGCGGAAGGAGGCAGTCAGCT
48526
48527
GTCCCTACTTGTTAGGGAAATCAATTGAATGGAAAC
TCGTGTTGGACAGTATCGTAATAACGAGTTTATTAAT
48599
48600
GTCCCTACTTGTTAGGGAAATCAATTGAATGGAAAC
GATTGCGGGCCAGTCGCTTGACCTTGCCAGTTCAAGA
48672
48673
GTCCCTACTTGTTAGGGAAATCAATTGAATGGAAAC
AAAATCTAGCTAACTGGCAAGGTTTTCTAGATGATT
48744
48745
GTCCCTACTTGTTAGGGAAATCAATTGAATGGAAAC
TGTATCGTCATTAGTTAGGTATGGGTAAGGGTAAGAAA
48818
48819
GTCCCTACTTGTTAGGGAAATCAATTGAATGGAAAC
CAAAATTCATTACATCTTCTTACTCTAAAGACTTAG
48890
48891
GTCCCTACTTGTTAGGGAAATCAATTGAATGGAAAC
AAGAGGGGATACCGGAGACTAACAGTGCAGGGCCAGGAT
48965
48966
GTCCCTACTTGTTAGGGAAATCAATTGAATGGAAAC
GGTAAGACTGAGGACGGCAGCGACCTGCTGTTTGACAG
49039
49040
GTCCCTACTTGTTAGGGAAATCAATTGAATGGAAAC
AGGAGTTAGCAGGAGATTAGACTACGGGACTAGCAAC
49112
49113
GTCCCTACTTGTTAGGGAAATCAATTGAATGGAAAC
TTGGCAGGGTTACACCGCAGACAGCGCAGACTTTCC
49184
49185
GTCCCTACTTGTTAGGGAAATCAATTGAATGGAAAC
TATCAGCAGCGAGGCACTGGCCCTTCTACTGACTCAACGA
49260
49261
GTCCCTACTTGTTAGGGAAATCAATTGAATGGAAAC
TATTGCGTACCCAAATGGAACCAATAGCGTGCTTTT
49332
49333
GTCCCTACTTGTTAGGGAAATCAATTGAATGGAAAC
GATGGGTTTTATGATTCTGGTCACTACTTCTACA
49402
49403
GTCCCTACTTGTTAGGGAAATCAATTGAATGGAAAC
AACTTCTATTAAATTACTACAAACCGCTATTTACGATA
49476
49477
GTCCCTACTTGTTAGGGAAATCAATTGAATGGAAAC
GAGCAGAGAAGGTCGATAAGAAGGCGCTGCAGAGATTT
49550
49551
GTCCCTACTTGTTAGGGAAATCAATTGAATGGAAAC
CAGTCGGTGGGATGGTCCCTCAGGCTAGCGAGACAG
49622
49623
GTCCCTACTTGTTAGGGAAATCAATTGAATGGAAAC
ATAACAGTTAGGGGGTCGAGAGGCCCCCTTCTCCTTA
49695
49696
GTCCCTACTTGTTAGGGAAATCAATTGAATGGAAAC
GGTGAATGTGCCTGGCGGCGCGGGGAAGAGTGACATAC
49769
49770
GTCCCTACTTGTTAGGGAAATCAATTGAATGGAAAC
AAAGTCACGGGCGGTGAAGCGACGCATCAACTTCTCAGCT
49845
49846
GTCCCTACTTGTTAGGGAAATCAATTGAATGGAAAC
TGGTTCTCAGCAGGTGACTGAGGGATGGAGCAAAGAT
49918
49919
GTCCCTACTTGTTAGGGAAATCAATTGAATGGAAAC
GATCGGAGCAGAGCTTACGCAATTCCCTGATGTTTAG
49991
49992
GTCCCTACTTGTTAGGGAAATCAATTGAATGGAAAC
GCAACTAAGACCGCACAGGCAGAGTTAAACCGATTC
50063
50064
GTCCCTACTTGTTAGGGAAATCAATTGAATGGAAAC
TACCTCAGTCATCGCTCACCCTCTTCTTCAGGTTCCCAG
50138
50139
GTCCCTACTTGTTAGGGAAATCAATTGAATGGAAAC
CCGCTTTAGGGGAGTCATCCTTAGCTGATCTTGCTTACC
50213
50214
GTCCCTACTTGTTAGGGAAATCAATTGAATGGAAAC
CTCTGATGTCCGCTTAGAGATCAGCCAGAGATAACTGAC
50288
50289
GTCCCTACTTGTTAGGGAAATCAATTGAATGGAAAC
ACCAGATAGAAGTTAGCTGTATGTCCTACCTGGTAAG
50361
50362
GTCCCTACTTGTTAGGGAAATCAATTGAATGGAAAC
CCCCTAACCTAAGCTGGCTAAGGGTTCTAAAATTTTTT
50435
50436
GTCCCTACTTGTTAGGGAAATCAATTGAATGGAAAC
CCGGGGTTGGTCATACCTGAGTAGTAAGACTCTTAT
50507
50508
GTCCCTACTTGTTAGGGAAATCAATTGAATGGAAAC
CTACTGTGAGTCAAGCAAATTTGCCTCTCCAGATAAC
50580
50581
GTCCCTACTTGTTAGGGAAATCAATTGAATGGAAAC
CTTGGGTAATGCGCTGGTTTCGTTCGGCGTTCTCTT
50652
50653
GTCCCTACTTGTTAGGGAAATCAATTGAATGGAAAC
GAGATAGACAACGTTATCAGGTTTGGACATATTACT
50724
50725
GTCCCTACTTGTTAGGGAAATCAATTGAATGGAAAC
CATAACCATGCTGCTGGCATCTCCATTGCACCAAT
50795
50796
GTCCCTACTTGTTAGGGAAATCAATTGAATGGAAAC
CTAAACATCATAAAATTGATGGTGGTTGGGAATATTG
50868
50869
GTCCCTACTTGTTAGGGAAATCAATTGAATGGAAAC
AGGTATCAATTCTCAAGAAAAGGCTAAAGCTTTAGACCT
50943
50944
GTCCCTACTTGTTAGGGAAATCAATTGAATGGAAAC
GTTGGATGCGGCGGGACAGCGGCGGTTCTACAACCTTT
51017
51018
GTCCCTACTTGTTAGGGAAATCAATTGAATGGAAAC
ACCCGCTCACGGAGCTGCTCGGCGCTGAACCCACCCCGG
51092
51093
GTCCCTACTTGTTAGGGAAATCAATTGAATGGAAAC
ACCGTAGCCTGCGGCTGATCTTCTACGACAGGTTGA
51164
51165
GTCCCTACTTGTTAGGGAAATCAATTGAATGGAAAC
GTAACTTAGAGTACACAGGCACCAAGTCCCATTGG
51235
51236
GTCCCTACTTGTTAGGGAAATCAATTGAATGGAAAC
AATGTGGACACGGATTGTCCCTTCCGTGTTAGTGGCAT
51309
51310
GTCCCTACTTGTTAGGGAAATCAATTGAATGGAAAC
ATCCTCTGCTTGCCACCCACCAGCTTGCGCTAGAAGAGTC
51385
51386
GTCCCTACTTGTTAGGGAAATCAATTGAATGGAAAC
AGCCAGTAGGTTAGAAACTGTGATATTCCCGGATAGC
51458
51459
GTCCCTACTTGTTAGGGAAATCAATTGAATGGAAAC
ACCAGGTTGCTGCCTTTTCTGCAATTTCACGCTTCAT
51531
51532
GTCCCTACTTGTTAGGGAAATCAATTGAATGGAAAC
AAGGCGGCCCCACACTTACCTAGCCGATGCTGTTAATC
51605
51606
GTCCCTACTTGTTAGGGAAATCAATTGAATGGAAAC
TCCCCATCGCTGGGGCTTAGTCATATCGACCCAGCAAA
51679
51680
GTCCCTACTTGTTAGGGAAATCAATTGAATGGAAAC
TGTTAACGCTTCCCACTTCTGGGTTGCACTTTTTAAA
51752
51753
GTCCCTACTTGTTAGGGAAATCAATTGAATGGAAAC
GGGGGATGCGTTCGACTCCCTGGCCTCCCTAGTTACT
51825
51826
GTCCCTACTTGTTAGGGAAATCAATTGAATGGAAAC
TCATTACCCCGCCCAAGATGCCCAGCCTCAGCCA
51895
51896
GTCCCTACTTGTTAGGGAAATCAATTGAATGGAAAC
AAAGGAGTTCGTCTATGAGTGAATACTTACCTTGGAAGA
51970
51971
GTCCCTACTTGTTAGGGAAATCAATTGAATGGAAAC
TGGGCGTAGTGCGCCTCATCTGCAATCAAGATATAT
52042
52043
GTCCCTACTTGTTAGGGAAATCAATTGAATGGAAAC
CCGCAACTGGGTATTAATCGGGAATCGTCGCCGGTCTTCAG
52119
52120
GTCCCTACTTGTTAGGGAAATCAATTGAATGGAAAC
TAGATGTAGTAATCACTGGCCTGGAAGAGACCAGGGAA
52193
52194
GTCCCTACTTGTTAGGGAAATCAATTGAATGGAAAC
GTCTGGTTACCATTGACTTCGACAAGCGCGAGGTTAA
52266
52267
GTCCCTACTTGTTAGGGAAATCAATTGAATGGAAAC
ACAGGCTCAGTGAGTATGAATTCAGCGAATTGACTCAAC
52341
52342
GTCCCTACTTGTTAGGGAAATCAATTGAATGGAAAC
TTTAGGTCAACTGGGAATATGCGTCCACTCGCCGATGG
52415
52416
GTCCCTACTTGTTAGGGAAATCAATTGAATGGAAAC
AGATTTACCTGTACCGCCATCAGCAAAGAAAATGCC
52487
52488
GTCCCTACTTGTTAGGGAAATCAATTGAATGGAAAC
TGCTGTAGCAGAAACAGCAATCCAGTAAGGTAGG
52557
52558
GTCCCTACTTGTTAGGGAAATCAATTGAATGGAAAC
GCAGGCTTGAACATGGCGCGCACAGCGAGCTTCATATC
52631
52632
GTCCCTACTTGTTAGGGAAATCAATTGAATGGAAAC
ATGACTAGGTAGATACGGTACAGCTCCTCTCGTAAAG
52704
52705
GTCCCTACTTGTTAGGGAAATCAATTGAATGGAAAC
AATCTATGAGAGCGGCTACTTGGGGGGTTACACCAA
52776
52777
GTCCCTACTTGTTAGGGAAATCAATTGAATGGAAAC
CCAACAGGTTGCTGCAGTACCCCCTATCCAGGCGGAG
52849
52850
GTCCCTACTTGTTAGGGAAATCAATTGAATGGAAAC
ATGTTGAAGTGGTTAGCTAGGAAGGATAAGTCAGGG
52921
52922
GTCCCTACTTGTTAGGGAAATCAATTGAATGGAAAC
TGGATGGTGGTATAGACAGACGGCGCCCAGGTGTGCTC
52995
52996
GTCCCTACTTGTTAGGGAAATAATTGAATGGAAACA
TCACACCATCCGGACCGACGATCGTGATGTTGCG
53065
53066
GTCCCTACTTGTTAGGGAAATCAATTGAATGGAAAC
CAGAGGCGGGGCGATCGGAGAGGGAGCAGCGAGGGCC
53138
53139
GTCCCTACTTGTTAGGGAAATCAATTGAATGGAAAC
GCCACGAGCACTGAAATTGTGGCTCAGGCGCTTCA
53209
53210
GTCCCTACTTGTTAGGGAAATCAATTGAATGGAAAC
TTCAATATGGGTTTCCCAGAGTCCACCACCTCGGAG
53281
53282
GTCCCTACTTGTTAGGGAAATCAATTGAATGGAAAC
ATACTCAATTTCGTTGCCGAAGCCGACAAAATTGCG
53353
53354
GTCCCTACTTGTTAGGGAAATCAATTGAATGGAAAC
TCCACCAGAAGTGGCCCTTGCTAGCGCTATAAGGCAG
53426
53427
GTCCCTACTTGTTAGGGAAATCAATTGAATGGAAAC
ACCGACTCATTGCCAACAACAGCAAACAATTCTCCAG
53499
53500
GTCCCTACTTGTTAGGGAAATCAATTGAATGGAAAC
GACGGCATCACGGTCCTCCTGCCAGGAGTCCAGGATA
53572
53573
GTCCCTACTTGTTAGGGAAATCAATTGAATGGAAAC
CCGACAGCGGGGATGCAAGTAGCCTCACGGTAGTCAC
53645
53646
GTCCCTACTTGTTAGGGAAATCAATTGAATGGAAAC
TTCACCTCGTACAGCACGACCTTGCAGACGTTCTGCA
53718
53719
GTCCCTACTTGTTAGGGAAATCAATTGAATGGAAAC
CGAGGGGGCCTTGAGGGGTTACTCTTCCACTTCGAG
53790
53791
GTCCCTACTTGTTAGGGAAATCAATTGAATGGAAAC
TACATAAAAGGAGAAATCTCATGGGTCTGTTTAAT
53861
53862
GTCCCTACTTGTTAGGGAAATCAATTGAATGGAAAC
GCCTTGTCCCACTTCTGGCGTTCCGACTCATTCTCACCG
53936
53937
GTCCCTACTTGTTAGGGAAATCAATTGAATGGAAAC
CAGGGGAGGGCTAGCCAATTTTGTATCAGTTATTCTC
54009
54010
GTCCCTACTTGTTAGGGAAATCAATTGAATGAAAAC
ACAAGACGAAAGGTGACACGCTGCTTCCCCTTCGG
54080
54081
GTCCCTACTTGTTAGGGAAATCAATTGAATGGAAAC
CATACTTGCCGTTAATGGTTTCCCAGAATTCCTTAG
54152
54153
GTCCCTACTTGTTAGGGAAATCAATTGAATGGAAAC
CGCCAGTAATCGACGAGAGTATTCGCGACCTTGATAA
54225
54226
GTCCCTACTTGTTAGGGAAATCAATTGAATGGAAAC
TTCACCTTGAATAGCTCCCACTAGTGGGAGGGCGAGGAC
54300
54301
GTCCCTACTTGTTAGGGAAATCAATTGAATGGAAAC
GTTACAATGAGGGGCGCAACATCGGTAACGCAAAAGTGC
54375
54376
GTCCCTACTTGTTAGGGAAATCAATTGAATGGAAAC
TCATCTCTATCGTAATTCCTTTACGTATGCAGTACTCAA
54450
54451
GTCCCTACTTGTTAGGGAAATCAATTGAATGGAAAC
AATGGACTCAGCTTAGAGCGCTTGCTAGCGCTATCTGA
54524
54525
GTCCCTACTTGTTAGGGAAATCAATTGAATGGAAAC
GATCATATTTCTGTTCGCAGTACCGAACCCAGAAGGA
54597
54598
GTCCCTACTTGTTAGGGAAATCAATTGAATGGAAAC
54633
Left flanking sequence : Till position 48240 (length
bp)
TTTTATTCGCTTGGATTATATACAAATTCCCTTCAGATTAAAATGAGACTCGCAAATGCCCTCTGGAAGC
TGCTCCTGGTATAGGGTGTAGACTATAGGG
Right flanking sequence : From position 54633 (length
bp)
CATCAAAATATTAATTAACTGAAGAACGCCAAAGAGGCAGGGATACTCTTGACCGTAGAGACTAATAAGG
AACGGTCCAGATACTTATTCCCCCGCTCAC
Print the CRISPR sequence : From position
bp To position
bp