CRISPR details
Home
About CRISPRs
News
FAQs
Help
Contact Us
Examples
IGM
Navigation
Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison
Other Tools
CRISPRcompar
CRISPRtionary
CRISPRfinder
GPMS Links
GPMS Team
Tandem Repeats DB
MLVA Web Service
CRISPRs details
NC_012623_3
Flanking alignement tool
Page manual
  
Home Page
NC_012623_3                                                                                                                 
top
Strain :
Sulfolobus islandicus Y.N.15.51
RefSeq :
NC_012623 (chromosome circular)
CRISPR id :
NC_012623_3
DR consensus (24 bp) :
CTTTCAATTCTATAGTAGATTAGC
Number of repetitions :
35
Begin Position :
1886795
End Position :
1889025
1886795
CTTTCAATTCTATAGTAGATTAGC
TGACATATACATTTAAATGTCAGGTTTTCATTTACACATG
1886858
1886859
CTTTCAATTCTATAGTAGATTAGC
TACGTTCTCTATGTTGAGAATAAGTGTTAAGAGTTAAAA
1886921
1886922
CTTTCAATTCTATAGTAGATTAGC
TCGATTTTTTGCCAAGGGTCTTATGTTACATTCATGTTACA
1886986
1886987
CTTTCAATTCTATAGTAGATTAGC
TCTCATTTTTTGCACAATTTACGCAAAATGACAGATTAAT
1887050
1887051
CTTTCAATTCTATAGTAGATTAGC
CTATCGGGAGTTTTAAATCATCGAATATGACCGCATAAAA
1887114
1887115
CTTTCAATTCTATAGTAGATTAGC
CGCGATTAATGTATTGGGGTCTTCCCACGCAACCCCGAA
1887177
1887178
CTTTCAATTCTATAGTAGATTAGC
TAAACAGTGTCTACTGAGACTGTAGCATTAGCACCGAATAC
1887242
1887243
CTTTCAATTCTATAGTAGATTAGC
GTACCTCACAGGGGTCACTCACTATTATTCCTGCCGACGA
1887306
1887307
CTTTCAATTCTATAGTAGATTAGC
ACAGAAGTGAAACCGCTGATTTCGAATGAAAAGAAAGAATT
1887371
1887372
CTTTCAATTCTATAGTAGATTAGC
TACAAATACCTCATAGACAATGTAACACGCAACCTAAGA
1887434
1887435
CTTTCAATTCTATAGTAGATTAGC
AAGGTGACAAAGCACTAATTATACAACCAATGCAAAGATTGGAAGA
1887504
1887505
CTTTCAATTCTATAGTAGATTAGC
AAAGAGTTTGCAATCACCAAACAAAATGATGAGGTTTGGTA
1887569
1887570
CTTTCAATTCTATAGTAGATTAGC
AACTGGATTTCCTTATCTAACCCTTCTGCGATAGCATTATT
1887634
1887635
CTTTCAATTCTATAGTAGATTAGC
AGCTCATATTTTTTCAGTTAAAGAATATACGACAAAACTTCA
1887700
1887701
CTTTCAATTCTATAGTAGATTAGC
CCCGCTACACCTGGACCTAGACCTCCTGCCAAACCACCTA
1887764
1887765
CTTTCAATTCTATAGTAGATTAGC
TATATTTGTCAGATAACGAAAAATAAGAATGACAAAGTA
1887827
1887828
CTTTCAATTCTATAGTAGATTAGC
TAAATTATTCACGCGATCCAGTGCAAATTTATAAATTAAGCACG
1887895
1887896
CTTTCAATTCTATAGTAGATTAGC
AGGTGGCTAAATCTGGACTAAGATTCTTGGTTTCATCTGAT
1887960
1887961
CTTTCAATTCTATAGTAGATTAGC
TTGATTGAGTGGTTTGGGTTTGACTTTGATTTTGTGTT
1888022
1888023
CTTTCAATTCTATAGTAGATTAGC
GGTGGAGGAGACACAATGTGCCGTGGAGGAGGTGGAGGAGG
1888087
1888088
CTTTCAATTCTATAGTAGATTAGC
AGCAGTTAAAATTGTTACTAAATCTAATTGTGTAACATTTTG
1888153
1888154
CTTTCAATTCTATAGTAGATTAGC
TCAGAAAATGACCTTGCACCTACCCATTTCGCAATTTCTTTAAA
1888221
1888222
CTTTCAATTCTATAGTAGATTAGC
AAAGGTCTAATAATCATAAAAAGTGAGATAAATCCTTCTAG
1888286
1888287
CTTTCAATTCTATAGTAGATTAGC
GAAGATCGAAAATTAAAGATAACTTTAAATTTGTCATAAT
1888350
1888351
CTTTCAATTCTATAGTAGATTAGC
AAGGCTTTGGTTTGAAGGTAGCTAGAGCGTTGAACAGACT
1888414
1888415
CTTTCAATTCTATAGTAGATTAGC
ACAGTCTTAAATGTACTTTTCGATATCGTAAACTTCTATGAG
1888480
1888481
CTTTCAATTCTATAGTAGATTAGC
AATTATGAATATGTTTAGTAACTAAAAACTTTAAATTAGGGTTT
1888548
1888549
CTTTCAATTCTATAGTAGATTAGC
GGTTGAGCTCCGCCCAATACCTCCCCTACCCTCCCTA
1888609
1888610
CTTTCAATTCTATAGTAGATTAGC
AGGAAAAAGTGAAAGAGAATCAGAATACCACAAACACGGCAA
1888675
1888676
CTTTCAATTCTATAGTAGATTAGC
CACTACAACAAATTCTATCAGCACTAACAACATCAGAGAT
1888739
1888740
CTTTCAATTCTATAGTAGATTAGC
TAGTTGAAAGATTAGAAGAAGAGGACATATATAATATTTTAGA
1888806
1888807
CTTTCAATTCTATAGTAGATTAGC
CAATGAACCCACTAGGAGGGTCACTCCCACCCTTCTAGTA
1888870
1888871
CTTTCAATTCTATAGTAGATTAGC
ACCAGATCTCAAATCCACGATAGCATTTCTAATAGAGAAATAT
1888937
1888938
CTTTCAATTCTATAGTAGATTAGC
CATTTAGTGGTGGTTCTGCTGGATCTGCACCTCTTCCAGC
1889001
1889002
CTTTCAATTCTATAGTAGATTAGC
1889025
Left flanking sequence : Till position 1886795 (length
bp)
AAGTAATTTGAAATGCTATAGGCTCAACTAGATTCTTCCCTCAAAAGAGTTGAATAACACCAAACGATGT
TTCCGTGTTTACCCATTTAAGATGAGCCCT
Right flanking sequence : From position 1889025 (length
bp)
TGAGGGTTTTTTAACCCTCTATTTAATCTTTTCTTCTCCCTTTCTTATAAGTTTTTCTTCTCTACTCTTT
CCATTAGTATTATATTACTCTTTCTTATCT
Print the CRISPR sequence : From position
bp To position
bp