CRISPR details
Home
About CRISPRs
News
FAQs
Help
Contact Us
Examples
IGM
Navigation
Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison
Other Tools
CRISPRcompar
CRISPRtionary
CRISPRfinder
GPMS Links
GPMS Team
Tandem Repeats DB
MLVA Web Service
CRISPRs details
NC_014160_1
Flanking alignement tool
Page manual
  
Home Page
NC_014160_1                                                                                                                 
top
Strain :
Thermosphaera aggregans DSM 11486
RefSeq :
NC_014160 (chromosome circular)
CRISPR id :
NC_014160_1
DR consensus (24 bp) :
GAAACAATAGAGAAAAATTGAAAG
Number of repetitions :
89
Begin Position :
772206
End Position :
777924
772206
GAAACAATAGAGAAAAATTGAAAG
CAGGGAATTCTTTAAAGCTTTAGAAGCGCAAAAAGTCGAGGA
772271
772272
GAAACAATAGAGAAAAATTGAAAG
GTTGATGGCTTAACAACAATTGGTTTTGGCGGTGTGA
772332
772333
GAAACAATAGAGAAAAATTGAAAG
ATATATGTAGTATCGGTAAGTGCTAGTGCTGTATCAGCAAATAAA
772401
772402
GAAACAATAGAGAAAAATTGAAAG
CGTATTACTAATACGCCTTTTCTGCCCTCATCGGTTTCGGTT
772467
772468
GAAACAATAGAGAAAAATTGAAAG
ACACTTAGTCGTGAAAAATCCAAGCCGAAAGAATACCCTG
772531
772532
GAAACAATAGAGAAAAATTGAAAG
CGCTATACTCCATCACATACAAGTTGTCCTCGCCCCGG
772593
772594
GAAACAATAGAGAAAAATTGAAAG
GTGTTAATAAAGCAACCCTACACCGCATACGCTATAATCGTGAA
772661
772662
GAAACAATAGAGAAAAATTGAAAG
TATATTGCTCGCGCAATTCTTTAAGCTCTTTTCTCAAA
772723
772724
GAAACAATAGAGAAAAATTGAAAG
ATCGCAGCAACGCTATCGAGCCTATGTGTTGATTCGTTG
772786
772787
GAAACAATAGAGAAAAATTGAAAG
ACGTTTGAATCCGCGATGGAAACATCGGCTTTAGTAAGA
772849
772850
GAAACAATAGAGAAAAATTGAAAG
ACCGCGAGGAGCGGGGCGAGAAATTATTGTTTCCTGTTG
772912
772913
GAAACAATAGAGAAAAATTGAAAG
CGTGTAAGGTTGCTAACGCTTGATAAGCTAACACCGTTCACCG
772979
772980
GAAACAATAGAGAAAAATTGAAAG
CTACGGGTTCGAGCTTAAAAAAGCCGTTTTCGAGAGCGA
773042
773043
GAAACAATAGAGAAAAATTGAAAG
TTGAGGCTCTCAGCTAGCTGGGGTATCAGCGATTTGAACACT
773108
773109
GAAACAATAGAGAAAAATTGAAAG
ATTTCTACATTTCATAATTGAGGTGTAATATATGTCCCAGAC
773174
773175
GAAACAATAGAGAAAAATTGAAAG
CGAACAAATTAATCATTAGTAATGGCAAAATGATATACGA
773238
773239
GAAACAATAGAGAAAAATTGAAAG
TATTGTTAAATGGTGTTTATTTGCTGATACAGCACTAGCAC
773303
773304
GAAACAATAGAGAAAAATTGAAAG
TCGCAGGGTCAAATGTGGTTATAGCGGACATTTATATCACCCC
773370
773371
GAAACAATAGAGAAAAATTGAAAG
TGTGCTTTACACGGCTGATGAACCGCCTCATTACCCAATTGA
773436
773437
GAAACAATAGAGAAAAATTGAAAG
ATGGAGCTAGAGCTCATAAAGCTAATTATCCTATTTCTAAT
773501
773502
GAAACAATAGAGAAAAATTGAAAG
TCATAGTTGAATATGACTCATACAGCGTTAATGCGTCGTCA
773566
773567
GAAACAATAGAGAAAAATTGAAAG
TACCATAAGCTTTTTTCATTAGTGATTTACAATGACGGCG
773630
773631
GAAACAATAGAGAAAAATTGAAAG
AAAATTGAAAGTATTTCACACTCCTCCAGGGGTGCATTTACACACCCCCTT
773705
773706
GAAACAATAGAGAAAAATTGAAAG
AGACAAGACTTCACGATTGGAGTAATAAACGATGTAGTAT
773769
773770
GAAACAATAGAGAAAAATTGAAAG
CTAGTCCCATATGTAAGGTCTAATATGCGTATTGGTGGCTTGA
773836
773837
GAAACAATAGAGAAAAATTGAAAG
TATCCATATTGTTCCGAATGACCTATTCATTTGTGCATT
773899
773900
GAAACAATAGAGAAAAATTGAAAG
TGGGACAGTGCCACTACGCATATGGCTGTGAGCCCAACTAT
773964
773965
GAAACAATAGAGAAAAATTGAAAG
AATAAGGAAATGAAGGAAGCGTTTGCGAAAAAGCTAAGA
774027
774028
GAAACAATAGAGAAAAATTGAAAG
GAGGATTGGATTCCTGGTAACTTGTGTGAGCCAATACTACGT
774093
774094
GAAACAATAGAGAAAAATTGAAAG
CACAACTCAAACTCAAATTAGCTATTACGAATTCGCAAATAAG
774160
774161
GAAACAATAGAGAAAAATTGAAAG
CACAAGCATATACAACTTGCTC
774206
774207
GACACAATGGATAAGTATGGAAAC
AATAGAGAAAAATTGAAAGCCGAACCCGTCGTGCTGGGTAGTGTAAAAGTTTACGAGCCT
774290
774291
GAAACAATAGAGAAAAATTGAAAG
TGTATTATATCCAATATTCCGTATATTCTAGCACTCATTGCAT
774357
774358
GAAACAATAGAGAAAAATTGAAAG
AAGATAAAAGTGAGCATTGTGAAAATAGGGAGTGGAAAAGC
774422
774423
GAAACAATAGAGAAAAATTGAAAG
CTCATTACCGCGCAATTGTTCAAGCTTATTTGCGAATTCGT
774487
774488
GAAACAATAGAGAAAAATTGAAAG
TCACGGCAAAGCCCTGGAAAACGTACGGCAGCATCGTGGCTACTGC
774557
774558
GAAACAATAGAGAAAAATTGAAAG
TCGCCTTCGACTTCACATCCCTCATCAACATGATAACGCA
774621
774622
GAAACAATAGAGAAAAATTGAAAG
TTAACCGTTTTTCTTCCCCTGTTCGCCACAGTTGGATTTTT
774686
774687
GAAACAATAGAGAAAAATTGAAAG
CTAAAAACATTAAGCCCAATGGGGATTAAAGGTAAAAGCAGGCT
774754
774755
GAAACAATAGAGAAAAATTGAAAG
TATATTCGCGTGAGTTTAAAGCGAAATGGCGAGATAGTTGT
774819
774820
GAAACAATAGAGAAAAATTGAAAG
TGAGGATAGGGATTGTCTGGGAGTGCCCGTGGACTCCCAGT
774884
774885
GAAACAATAGAGAAAAATTGAAAG
TTTGATACGGTAAACAAAATACAACATGATTAGTAAGATAAATA
774952
774953
GAAACAATAGAGAAAAATTGAAAG
TTAATTTTACCGGTACGGGATAATTTTTCATCACAAAGG
775015
775016
GAAACAATAGAGAAAAATTGAAAG
TTTTTAATCAATTGGGAAGCGTTAATAGCTCTTACCA
775076
775077
GAAACAATAGAGAAAAATTGAAAG
AGACTTGAGACCCAGGGACATGA
775123
775124
GACCCCACCGAGAAACATAGAAAC
AATAGAGAAAAATTGAAAGTAATAAACGCTCACGGGTGAAACGCTTAGTGCATGTAG
775204
775205
GAAACAATAGAGAAAAATTGAAAG
CTTGAAAACCGTCACCTGGCTGGTGTAGTCCTCGATGACAAACTTTCT
775276
775277
GAAACAATAGAGAAAAATTGAAAG
CTACAACATTGTTTAGACTAATACCTTTATGCTCAGCTAATTG
775343
775344
GAAACAATAGAGAAAAATTGAAAG
TTGTATCGATAGCTATTAACATGGGCTTGTCGCTTA
775403
775404
GAAACAATAGAGAAAAATTGAAAG
AGCCCAGCCCCGAAGCTCAGCCTTTTTTTCAAGCCCTTTCCT
775469
775470
GAAACAATAGAGAAAAATTGAAAG
TGTGCCCCTCCGTAGTGATTGCTACTTTCTGCTGTGTTA
775532
775533
GAAACAATAGAGAAAAATTGAAAG
CAGCACATTGGATATGGTATAAACCTCTATTATAAGTG
775594
775595
GAAACAATAGAGAAAAATTGAAAG
AGAGTGGATTGTGAACAAGGGGACTGTGAGCGAGGAGGAGAA
775660
775661
GAAACAATAGAGAAAAATTGAAAG
TTCTTACATTCTTACGCGGAATTTTCCGCGTGTAAGAATG
775724
775725
GAAACAATAGAGAAAAATTGAAAG
GTCTCGCGTGCTAGCAGGTTGAGTGCGGTCGGGGTTTTAGTC
775790
775791
GAAACAATAGAGAAAAATTGAAAG
ATAACGTTGAGTTGCTGTTCAACGTGCCCAGGGATAAGCTCA
775856
775857
GAAACAATAGAGAAAAATTGAAAG
GACGCCCTAGCCTTCGCGATCCCCTGCTTCGTCCTCTCGC
775920
775921
GAAACAATAGAGAAAAATTGAAAG
AGAAATACAAGCGATATAAGATAAAAG
775971
775972
GAAACAATAGAGAAAAATTGAAAG
AGTAGGAAGCCGTCGGGGCTTCTTGTTTTATCGTAAA
776032
776033
GAAACAATAGAGAAAAATTGAAAG
AGGGCCACGCCAAGGACAGCTAAGAGCGGTATAAGCTTC
776095
776096
GAAACAATAGAGAAAAATTGAAAG
CTTAAAAACGGTCCTCCAAACCCCCCGGTAACGCCCCA
776157
776158
GAAACAATAGAGAAAAATTGAAAG
CTTAGTGCTTACTGAAACATATGACAACTATGTGAACAGTAAGAAT
776227
776228
GAAACAATAGAGAAAAATTGAAAG
AGCCAGCACGAGTTAAGCGTCCACGTCTCGTTTGTTTTGTT
776292
776293
GAAACAATAGAGAAAAATTGAAAG
CTAACGCCAATACCTCTTCAACCATAGCCCACTGTGGCAG
776356
776357
GAAACAATAGAGAAAAATTGAAAG
TTTTTTAACAACGCTAAAACATCACTGTCAATCATAATG
776419
776420
GAAACAATAGAGAAAAATTGAAAG
TTATGCTGGTTTTGAAGAAATTGGTTGAGTCAACCAGGTAAATT
776487
776488
GAAACAATAGAGAAAAATTGAAAG
ACTTACTTATGTTAAAATCGTAGATATCTTGAAAACGCT
776550
776551
GAAACAATAGAGAAAAATTGAAAG
AGACAGCGCTAGAGAATGGTCATGTTAAGAAGCTAGGGTTTA
776616
776617
GAAACAATAGAGAAAAATTGAAAG
TCGAAATACCATGTGTAAAGATGGGGTGCTATAGTGTCGCCGG
776683
776684
GAAACAATAGAGAAAAATTGAAAG
ATTTGATAACTTGTAATGTAGTCATTTACTCCTAGATAG
776746
776747
GAAACAATAGAGAAAAATTGAAAG
AATATGGTTGTTTTCAAGCGCTATAGCAAGCTCGGGGGTT
776810
776811
GAAACAATAGAGAAAAATTGAAAG
CGCGGAAACGCAGCAGTTTAAAATCCGAACCAATCGGT
776872
776873
GAAACAATAGAGAAAAATTGAAAG
AATATGTAAAGGAGAAAATCCTGTATTATGAGAAAAACGGGAAT
776940
776941
GAAACAATAGAGAAAAATTGAAAG
ATTCAGCGTGTCAATGCTAGTGTCCTTATAGAAGTTGAACACCT
777008
777009
GAAACAATAGAGAAAAATTGAAAG
CAATCTATATGATGTGCCATTCCATATTATTAAATGGTGTT
777073
777074
GAAACAATAGAGAAAAATTGAAAG
TTAATAAGGATATTAGAAAAACCCAAAAAGCGAAAAATATA
777138
777139
GAAACAATAGAGAAAAATTGAAAG
GGGTTTACAGGCTCACGGGCCTCGGTGAATACTATGT
777199
777200
GAAACAATAGAGAAAAATTGAAAG
TATGGAAACATATCCCGCATAGAAGATTCGAGAAAATGGCT
777264
777265
GAAACAATAGAGAAAAATTGAAAG
AAGCAAAAACCAAACCCACAGGTTAACTCCCCAAACCAG
777327
777328
GAAACAATAGAGAAAAATTGAAAG
CCAGTATTACATTCACGGAAGACTTCACGGTCTGCACTAA
777391
777392
GAAACAATAGAGAAAAATTGAAAG
GTATAAAATGATATTTGAGAAATGCTATAGGGATAAAAC
777454
777455
GAAACAATAGAGAAAAATTGAAAG
ACCATTGCCAAGCCAATCGTCATGTTCAACAAGCTCGACAG
777519
777520
GAAACAATAGAGAAAAATTGAAAG
TGTGCAACGTTGAACGGGTTGACGTAGTCGCTTAGCAT
777581
777582
GAAACAATAGAGAAAAATTGAAAG
CCTCCCACGGGGCCAGAGGACCCTCCTATTAAACTATGGT
777645
777646
GAAACAATAGAGAAAAATTGAAAG
GTTGACAGGGCGGTTGTCAGGCTTGGCGATGCTAATATTGA
777710
777711
GAAACAATAGAGAAAAATTGAAAG
GCGTTTATCGCTTAACCGCTCTAGGCGAATACTACGTTAA
777774
777775
GAAACAATAGAGAAAAATTGAAAG
ATCGTTTCCCAGAGGGTCAATCCTACCTACCCATGCATT
777837
777838
GAAACAATAGAGAAAATTGAAAGT
TCATATCCGTATGCGTATTGTGGATTGAGCTTCCTAACC
777900
777901
GAAACAATAGGGAAAAATTGAAAG
777924
Left flanking sequence : Till position 772206 (length
bp)
GATCAACCCCCCAACACCATCACGCGCAGACCCCGATCAAAAAGCAAAACATTAAATACCAGTAGCAAAC
CTAAAATAAACAATGAAACAAGCAAAAACG
Right flanking sequence : From position 777924 (length
bp)
ACTATTCTTTTGTCTTGATGGATTGGAACGATGGGGGGTGGGTGGTTTTCGGCTGGGATTTGGGCTGTTT
CTCGGCGGGTTTGATGGTGGGGGTTGAAGG
Print the CRISPR sequence : From position
bp To position
bp