Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_014721_12                                                                                                                 top


Strain : Caldicellulosiruptor kristjanssonii 177R1B RefSeq :NC_014721 (chromosome circular)
CRISPR id : NC_014721_12
DR consensus (31 bp) : GTTTGTAGCCTTCCCTTTGGGGATTGAGGTGNumber of repetitions :4
Begin Position : 2740676 End Position : 2740907

2740676GTTTGTAGCCTTCCCTTTGGGGATTGAGGTATAGTATACCACTTTGCTGTTTTGGGACCAGGTCCT 2740741
2740742GTTTGTAGCCTTCCCTTTGGGGATTGAGGTGGGGATTGAATGATGAACAACTCAAAACAGTGCTTGA 2740808
2740809GTTTGTAGCCTTCCCTTTGGGGATTGAGGTGTTTCTTCTACCACTGGTGTTTTTGTTTTTTTAGTTGT 2740876
2740877GTTTGTAGCCTTCCCTTTGGGGATTGAGGTG2740907
Left flanking sequence : Till position 2740676 (length bp)
TATGCAGCTGGGTTTGTGTTGATTTTGTGGGGATGTATTAAAATAAAAACATTGACAGGGGTGCATAAAG
TTGATATAATAAAATCAAGCTTTTCAACCT
Right flanking sequence : From position 2740907 (length bp)
GAAGAAGGGTTTGTGGTCTCCCGTTTGAGAATTGAAAAAAAAGATAAACAAAACAAAAAAGCTACAGGTG
GCATGATATGGTAATTTATGCCCTTACCTG
Print the CRISPR sequence : From position bp To position bp