Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_015169_1                                                                                                                 top


Strain : Deinococcus proteolyticus MRP RefSeq :NC_015169 (plasmid pDEIPR01 )
CRISPR id : NC_015169_1
DR consensus (37 bp) : GTTTCAATCCTCACCCAGCCCGAAGGCCGGGTGCAACNumber of repetitions :18
Begin Position : 197312 End Position : 198572

197312CTATGGCGTTGTATCCAGCCCGAAGGCCGGGTGCAACCTGCTGACCAGCGGCGAGGCGCTGACCCCGCAGGAAA 197385
197386GTTTCAATCCTCACCCAGCCCGAAGGCCGGGTGCAACGGTTTTGTGCGGGCCTATTCGCCAAGCATCATTCAT 197458
197459GTTTCAATCCTCACCCAGCCCGAAGGCCGGGTGCAACACGCTGATTCCAGGCACAGATAAGGTCTACATCCCT 197531
197532GTTTCAATCCTCACCCAGCCCGAAGGCCGGGTGCAACAAGATGGTCTGATATATAAAGGATTTTAGAGAAGGT 197604
197605GTTTCAATCCTCACCCAGCCCGAAGGCCGGGTGCAACGACAGCGAGAGTCTTCCGGCCGCCCCCGTACGGCCG 197677
197678GTTTCAATCCTCACCCAGCCCGAAGGCCGGGTGCAACGCGGGCGAAGAGCAGGCCGACCAGCTCTACAAC 197747
197748GTTTCAATCCTCACCCAGCCCGAAGGCCGGGTGCAACCGCCGCAGGGGCAGAAGAAGGAGCATGTACCCA 197817
197818GTTTCAATCCTCACCCAGCCCGAAGGCCGGGTGCAACGCCCGTGTCTGGCTCAGGCGGCGGCGCAGCACTTCG 197890
197891GTTTCAATCCTCACCCAGCCCGAAGGCCGGGTGCAACGCGGATTTTTCCGCCGACCTGCTGAAACTGAAAAAC 197963
197964GTTTCAATCCTCACCCAGCCCGAAGGCCGGGTGCAACCAGACCCGCGCCAGCAGCGCCGCCAGCGCGGCCGC 198035
198036GTTTCAATCCTCACCCAGCCCGAAGGCCGGGTGCAACTTCAAGAGTGAGGCGGCTGGCCCAACGAGGCAT 198105
198106GTTTCAATCCTCACCCAGCCCGAAGGCCGGGTGCAACTTTGACGTACGGCTTGCCGGTGGGCACCGCCAG 198175
198176GTTTCAATCCTCACCCAGCCCGAAGGCCGGGTGCAACCAAGATTGAGAGCGCACGCATAGAAAACCCGTTTA 198247
198248GTTTCAATCCTCACCCAGCCCGAAGGCCGGGTGCAACGCTATTCATTCAGCCCGAAGTGAGGTTTGACTCGT 198319
198320GTTTCAATCCTCACCCAGCCCGAAGGCCGGGTGCAACATCACCGGCAGGGCGGGCGGGGCGGCCGCAGAGCG 198391
198392GTTTCAATCCTCACCCAGCCCGAAGGCCGGGTGCAACCGGCCCGGAGTGCTGCCACATGCTGATCGCGGAG 198462
198463GTTTCAATCCTCACCCAGCCCGAAGGCCGGGTGCAACGTAGGTGAGGGTGTACTCACGCTCGAACACCTTTTT 198535
198536GTTTCAATCCTCACCCAGCCCGAAGGCCGGGTGCAAC198572
Left flanking sequence : Till position 197312 (length bp)
ACCTGAAAGACGACCTGGCGGGGTGGTGAAGGGCATGGAAGCACCGGGTACGCTTGGTTGACCAAAGGAG
CAACGTAGGTTTCGACGTAACCTTCCTTGC
Right flanking sequence : From position 198572 (length bp)
GGTCCCCTGGTTTCTACTGTTGGATACAGGGAGCCAGCACCATTCTGCGCGAATCAGCTGCGGGGCGCCA
CCCGGCGTGACCCCGACAGCACATCAGGCC
Print the CRISPR sequence : From position bp To position bp