Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_015276_3                                                                                                                 top


Strain : Marinomonas mediterranea MMB-1 RefSeq :NC_015276 (chromosome circular)
CRISPR id : NC_015276_3
DR consensus (35 bp) : GTCTCAACGGCCTAAGCGGCCAGCGGGTCTGAAACNumber of repetitions :9
Begin Position : 710346 End Position : 710944

710346TCGTCACACGTCTCAACGACCAGCGGGTCTGAAACAGAACGCACTTGTGCGCGCAGGTTTATGCGTCAAA 710415
710416GTCTCAACGGCCTAAGCGGCCAGCGGGTCTGAAACGACTTAATCCATCTGACGTGTTCTCAACTTCTATCTAA 710488
710489GTCTCAACGGCCTAAGCGGCCAGCGGGTCTGAAACCTATCGTATAGCTGAAGACTTGAGCAAGTATTACTT 710559
710560GTCTCAACGGCCTAAGCGGCCAGCGGGTCTGAAACAGCTTGATGAGGAGATGATGGCAATACCGCCAAA 710628
710629GTCTCAACGGCCTAAGCGGCCAGCGGGTCTGAAACATTCTGCTCCCATGCCTCCCAGTCTTCGTTCAGTAA 710699
710700GTCTCAACGGCCTAAGCGGCCAGCGGGTCTGAAACATTGATAATTTCCGCCATAACGAAGATAATATCTT 710769
710770GTCTCAACGGCCTAAGCGGCCAGCGGGTCTGAAACTCTGAATACTAACGAAAAATAGAAACCCCAACCCCCA 710841
710842GTCTCAACGGCCTAAGCGGCCAGCGGGTCTGAAACGGGGAATTGGTTTGCGTGGCGGAGATCTTTAAA 710909
710910GTCTCAACGGCCTAAGCGGCCAGCGGGTCTGAAAC710944
Left flanking sequence : Till position 710346 (length bp)
AAAGCTCGCTCCTCTCACTTACTTAAGGCTGGGAGGGGGTCTTGTCTAACGGATCGCCCCCAGTTAAACC
GAACCGTTCCAATCCAACAGTCATGGTTCA
Right flanking sequence : From position 710944 (length bp)
AGTACCCTTATTTTTTCCAATCATTTCAGCAGGTTAACCTAGCGTTTCCCCCGCCCTCAAGTTATCCACA
AGAGGTATGCTTAAAATTAGTGAATTTTCG
Print the CRISPR sequence : From position bp To position bp