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CRISPRs details
NC_015433_2
Flanking alignement tool
Page manual
  
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NC_015433_2                                                                                                                 
top
Strain :
Streptococcus suis ST3
RefSeq :
NC_015433 (chromosome circular)
CRISPR id :
NC_015433_2
DR consensus (36 bp) :
GTTTTACTGTTACTTAAATCTTGAGAGTACAAAAAC
Number of repetitions :
50
Begin Position :
1318035
End Position :
1321367
1318035
TGATTACGATAATATAAATCTTGAGAGTACAAAAAC
TACAAATGTTATGGGGATAACTACCAGAAG
1318100
1318101
GTTTTACTGTTACTTAAATCTTGAGAGTACAAAAAC
TTAACTGAAAATTAGTAGCGTAAGGAAGTG
1318166
1318167
GTTTTACTGTTACTTAAATCTTGAGATTACAAAAAC
TTAACTGAAATTTAGTAGCGTAAGGAAGTG
1318232
1318233
GTTTTACTGTTACTTAAATCGTGAGAGTACAAAAAC
TTAACTGAAAATTAGTAGCGGAAGGAAGTG
1318298
1318299
GTTTTACTGTTACTTAGATCTTGAGAGTACAAAAAC
CTTCCTCTTTTACTTCTTTATTTGTTTCTA
1318364
1318365
GTTTTACTGTTACTTAGATCTTGAGAGTACAAAAAC
TTTCCTCTCTTACTTCTTTATTTGTTACTA
1318430
1318431
GTTTTACTGTTACTTAGATCTTGAGAGTACAAAAAC
CCTGTAGATGTTAACCCACTCGATAATCC
1318495
1318496
GTTTTACTGTTACTTAGATCTTGAGAGTACAAAAAC
TTAACTGAAAATTAGTAGCGTAAGGAGCCC
1318561
1318562
GTTTTACTGTTACTTAAATCTTGAGAGTACAAAAAC
GACAAGGTCGAAAAGAAATACATTGATGTT
1318627
1318628
GTTTTACTGTTACTTAAATCTTGAGAGTACAAAAAC
CAACATGGTTTTGATCCCACGTTTGGCCA
1318692
1318693
GTTTTACTGTTACTTAAATCTTGAGAGTACAAAAAC
CAACATGGTTTTGATCCCACGTTTGGCCA
1318757
1318758
GTTTTACTGTTACTTAAATCTTGAGAGTACAAAAAC
CAACATGGTTTTGATCCCACGTTTGGCCA
1318822
1318823
GTTTTACTGTTACTTAAATCTTGAGAGTACAAAAAC
CAACATGGTTTTGATCCCACGTTTGGCCA
1318887
1318888
GTTTTACTGTTACTTAAATCTTGAGAGTACAAAAAC
CAACATGGTTTTGATCCCACGTTTGGCCA
1318952
1318953
GTTTTACTGTTACTTAAATCTTGAGAGTACAAAAAC
CAACATGGTTTTGATCCCACGTTTGGCCA
1319017
1319018
GTTTTACTGTTACTTAAATCTTGAGAGTACAAAAAC
CCTGCAGATGTTAACCCACTCAATAATCC
1319082
1319083
GTTTTACTGTTACTTAAATCTTGAGAGTACAAAAAC
CAACATGGTTTTGATCCCACGTTTGGCCA
1319147
1319148
GTTTTACTGTTACTTAAATCTTGAGAGTACAAAAAC
CAACATGGTTTTGATCCCACGTTTGGCCA
1319212
1319213
GTTTTACTGTTACTTAAATCTTGAGAGTACAAAAAC
CAGTATTAATTGGGATATTATTTATCTTAG
1319278
1319279
GTTTTACTGTTACTTAAATCTTGAGAGTACAAAAAC
CAGTATTAATTGGGATATTATTTATCTTAG
1319344
1319345
GTTTTACTGTTACTTAAATCTTGAGAGTACAAAAAC
CAGTATTAATTGGGATATTATTTATCTTAG
1319410
1319411
GTTTTACTGTTACTTAAATCTTGAGAGTACAAAAAC
CAGTATTAATTGGGATATTATTTATCTTAG
1319476
1319477
GTTTTACTGTTACTTAAATCTTGAGAGTACAAAAAC
CAGTCTCTTTTACTTCTTTATTTGTTACTA
1319542
1319543
GTTTTACTGTTACTTAAATCTTGAGAGTACAAAAAC
CAGTATTAATTGGGATATTATTTATCTTAG
1319608
1319609
GTTTTACTGTTACTTAAATCTTGAGAGTACAAAAAC
CAGTATTAATTGGGATATTATTTATCTTAG
1319674
1319675
GTTTTACTGTTACTTAAATCTTGAGAGTACAAAAAC
CAGTATTAATTGGGATATTATTTATCTTAG
1319740
1319741
GTTTTACTGTTACTTAAATCTTGAGAGTACAAAAAC
CAGTATTAATTGGGATATTATTTATCTTAG
1319806
1319807
GTTTTACTGTTACTTAAATCTTGAGAGTACAAAAAC
CAGTATTAATTGGGATATTATTTATCTTAG
1319872
1319873
GTTTTACTGTTACTTAAATCTTGAGAGTACAAAAAC
CAGTATTAATTGGGATATTATTTATCTTAG
1319938
1319939
GTTTTACTGTTACTTAAATCTTGAGAGTACAAAAAC
TGGCCACGATGCGGTCCAAAGAGATAATTA
1320004
1320005
GTTTTACTGTTACTTAAATCTTGAGAGAACAAAAAC
GACAAGGTCGAAAAGAAATACATTGACGTT
1320070
1320071
GTTTTACTGTTACTTAAATCTTGAGGGTACAAAAAC
GAAAGGACTGGGACATATCCAAATTGTCGA
1320136
1320137
GTCTTACTGTTACTTAAATCTTGAGGGTACAAAAAC
GAAAGGACTGGGACATATCCAAATTGTTGA
1320202
1320203
GTTTTACTGTTACTTAAATCTTGAGGGTACAAAAAC
GAAAGGACTGGGACATATCCAAATTGTTGA
1320268
1320269
GTTTTACTGTTACTTAAATCTTGAGGGTACAAAAAC
GAAAGGACTGGGACATATCCAAATTGTTGA
1320334
1320335
GTTTTACTGTTACTTAAATCTTGAGAGAACAAAAAC
GACAAGGTCGAAAAGAAATACATTGACGTT
1320400
1320401
GTTTTACTGTTACTTAAATCTTGAGAGTACAAAAAC
AAACTTTTTTGAAATTTGCTAAAAAAGTTC
1320466
1320467
GTTTTACTGTTACTTAAATCTTGAGAGTACAAAAAC
CAGTATTAATTGGGATATTATTTATCTTAG
1320532
1320533
GTTTTACTGTTACTTAAATCTTGAGAGTACAAAAAC
CAGTATTAATTGGGATATTATTTATCTTAG
1320598
1320599
GTTTTACTGTTACTTAAATCTTGAGAGTACAAAAAC
CAGTATTAATTGGGATATTATTTATCTTAG
1320664
1320665
GTTTTACTGTTACTTAAATCTTGAGAGTACAAAAAC
CAGTATTAATTGGGATATTATTTATCTTAG
1320730
1320731
GTTTTACTGTTACTTAAATCTTGAGAGTACAAAAAC
CAGTATTAATTGGGATATTATTTATCTTAG
1320796
1320797
GTTTTACTGTTACTTAAATCTTGAGAGTACAAAAAC
CAGTATTAATTGGGATATTATTTATCTTAGGTTTTACTGTTACTTAGTATTAATTGGGATATTATTTATCTTAG
1320906
1320907
GTTTTACTGTTACTTAAATCTTGAGAGTACAAAAAC
CAGTATTAATTGGGATATTATTTATCTTAG
1320972
1320973
GTTTTACTGTTACTTAAATCTTGAGAGTACAAAAAC
CAGTATTAATTGGGATATTATTTATCTTAG
1321038
1321039
GTTTTACTGTTACTTAAATCTTGAGAGTACAAAAAC
CAGTATTAATTGGGATATTATTTATCTTAG
1321104
1321105
GTTTTACTGTTACTTAAATCTTGAGAGTACAAAAAC
CAGTATTAATTGGGATATTATTTATCTTAG
1321170
1321171
GTTTTACTGTTACTTAAATCTTGAGAGTACAAAAAC
CAGTATTAATTGGGATATTATTTATCTTAG
1321236
1321237
GTTTTACTGTTACTTAAATCTTGAGAGTACAAAAAC
CAGTATTAATTGGGATATTATTTATCTTAGGAAGGATTGGGACATATCCAAATTGTCGA
1321331
1321332
GTTTTACTGTTACTTAAATCTTGAGAGTACAAAAAC
1321367
Left flanking sequence : Till position 1318035 (length
bp)
TTTGTCTCCTTTTAAAAAACTGATACAACTATTATAGCATGAAGCAAGCAAGACAAAACAAGAATTTTAG
AAAATTGTGGGGGAGATGTACTATCGCTTA
Right flanking sequence : From position 1321367 (length
bp)
CTCAAATGGTTTTTGTACTCTCTTCCGTAATTATAATATTTATCGAAAAACTTGTCAAATTTAGGAAGAA
AGGTAATTTTCCTCTAATTTTGATATTCCT
Print the CRISPR sequence : From position
bp To position
bp