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CRISPRs details
NC_015499_1
Flanking alignement tool
Page manual
  
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NC_015499_1                                                                                                                 
top
Strain :
Thermodesulfobium narugense DSM 14796
RefSeq :
NC_015499 (chromosome circular)
CRISPR id :
NC_015499_1
DR consensus (30 bp) :
GTTTTTACGATACCTATGAGGAATTGAAAC
Number of repetitions :
85
Begin Position :
807036
End Position :
812677
807036
GTTTTTACGATACCTATGAGGAATTGAAAC
CAGGACGAATATAAAGAAGATAATCTCAGACATTGAGA
807103
807104
GTTTTTACGATACCTATGAGGAATTGAAAC
CGCTATTCGCTCAAGCTCACTAGTCGACATAAGCC
807168
807169
GTTTTTACGATACCTATGAGGAATTGAAAC
AAAAAAGAAATAAGTTTGTCTTCTTCTGAAATATC
807233
807234
GTTTTTACGATACCTATGAGGAATTGAAAC
CATTTCCATCTATACCAAGCCAGTTGTTCAGGAGTAA
807300
807301
GTTTTTACGATACCTATGAGGAATTGAAAC
GCGTAAACTGTAATAAGTTTACACTCGTCGTCGT
807364
807365
GTTTTTACGATACCTATGAGGAATTGAAAC
TGGGATGGTCTGGGTCCAGCCCACACCAATCCCAG
807429
807430
GTTTTTACGATACCTATGAGGAATTGAAAC
GCAGTTGGGACATGCGATGATGCCCACAATAATTTTT
807496
807497
GTTTTTACGATACCTATGAGGAATTGAAAC
AATGACAATATAAATATTTTGTTTGATAGATTTGTCACAA
807566
807567
GTTTTTACGATACCTATGAGGAATTGAAAC
TGTAATCGTTAATGATATTTTCAATATCGATTTCTAA
807633
807634
GTTTTTACGATACCTATGAGGAATTGAAAC
AAAGTTCTTTTTATTTCTCTTACAAAGTCGTTATCGT
807700
807701
GTTTTTACGATACCTATGAGGAATTGAAAC
AAATTTCTTTAAATTTTTTGATGTCTTCTGTTAC
807764
807765
GTTTTTACGATACCTATGAGGAATTGAAAC
GAAAGTATACGAAATACTTTCTGAATTGAAATTTCTC
807831
807832
GTTTTTACGATACCTATGAGGAATTGAAAC
AGCTTTTTCACAAAAATTTTCATCATTTTATCCAC
807896
807897
GTTTTTACGATACCTATGAGGAATTGAAAC
GTAGAAGAAGCTGCTTGTCTTGGTTTCAAAACAACCA
807963
807964
GTTTTTACGATACCTATGAGGAATTGAAAC
TGAATAAAGTGCTTGACAGAAAAAAAGAAAATGTAA
808029
808030
GTTTTTACGATACCTATGAGGAATTGAAAC
TAATCTTGGAAGAACTGGTGGAGAAAGCACAGTTTCAG
808097
808098
GTTTTTACGATACCTATGAGGAATTGAAAC
AGAAAGATTTACTGGTATTTCTGTTTTTGAAACTTTTT
808165
808166
GTTTTTACGATACCTATGAGGAATTGAAAC
AGGAAAGTGTAAAAGACATATAAAACATCGTCCCTATA
808233
808234
GTTTTTACGATACCTATGAGGAATTGAAAC
CTAAGAAAGAACTCCCTCAACCCCCAAGATCACTACTA
808301
808302
GTTTTTACGATACCTATGAGGAATTGAAAC
CAATTTTGTTATTTGGTTGTGTTACAATTGTTTTTT
808367
808368
GTTTTTACGATACCTATGAGGAATTGAAAC
GAACTCTATAATATAGGCGACATGACAATATATGTTGA
808435
808436
GTTTTTACGATACCTATGAGGAATTGAAAC
CTAAACAAGATATTAACGATATAGCAAATGCCTTAGTCCA
808505
808506
GTTTTTACGATACCTATGAGGAATTGAAAC
AGTTCCTTGTCAGGGCAGGAAGTGTCCTGAAAAGGAAA
808573
808574
GTTTTTACGATACCTATGAGGAATTGAAAC
TGGGTAAAACACTTGACAAGAAAAAAAGAAAAGAATA
808640
808641
GTTTTTACGATACCTATGAGGAATTGAAAC
GTCGATAAGAAAAATTTATAAATATGAACAAAAA
808704
808705
GTTTTTACGATACCTATGAGGAATTGAAAC
TATACGTCTTCTGACCATGACTGGCATGTGCATATATATG
808774
808775
GTTTTTACGATACCTATGAGGAATTGAAAC
AAGGTAGCAACGTCTCCATTAACAAACCCTCATTGG
808840
808841
GTTTTTACGATACCTATGAGGAATTGAAAC
GGAGCGCAGTTGTGGTTTCGAACTCTTCTTCGTCCAG
808907
808908
GTTTTTACGATACCTATGAGGAATTGAAAC
ACGAGCGTGCAAGAAAGAAACCAAGATGGTGGTGCGGCTG
808977
808978
GTTTTTACGATACCTATGAGGAATTGAAAC
ATGAAACTTTTAAAAAAGGAGTGATATAAATGATGA
809043
809044
GTTTTTACGATACCTATGAGGAATTGAAAC
AAAGCAATGAAAGAATATAGAGAAATTTCACTTCAGA
809110
809111
GTTTTTACGATACCTATGAGGAATTGAAAC
TCGGATACTTCAAGTTATATAAAAAATTTCTTTAA
809175
809176
GTTTTTACGATACCTATGAGGAATTGAAAC
GTTTTTGAAAAAACTGTAAAAGAACTTCTGAAAGGTTA
809243
809244
GTTTTTACGATACCTATGAGGAATTGAAAC
TCTATTTTCTAATGCTGAAAAGGTATTTTCCCCTT
809308
809309
GTTTTTACGATACCTATGAGGAATTGAAAC
ACAGAAGAAATGAGATTAGCATTTAGAACTATTCAAA
809375
809376
GTTTTTACGATACCTATGAGGAATTGAAAC
ATCGTTCCCTTCACTATCAGATTTTGCAAATAGTTAT
809442
809443
GTTTTTACGATACCTATGAGGAATTGAAAC
AGTCAATCTGGGTCAACAGCACCAGTTTTTTCAAATGA
809510
809511
GTTTTTACGATACCTATGAGGAATTGAAAC
TTTCAAATCCGTCACAATAGAAAGGGTCTGCTCCA
809575
809576
GTTTTTACGATACCTATGAGGAATTGAAAC
CAACATTTTTTTCTAACATTGCAATATTTATTTTA
809640
809641
GTTTTTACGATACCTATGAGGAATTGAAAC
CAGTTTTTTCAAAAATTAATTTCATTTTACTCCTTCC
809707
809708
GTTTTTACGATACCTATGAGGAATTGAAAC
ACGAAAGAAGAGTATCAGGACCTCCTCGTCCTGA
809771
809772
GTTTTTACGATACCTATGAGGAATTGAAAC
ACACAGGCGCAAAATTCTTCAAATAGAGGCACTTCAA
809838
809839
GTTTTTACGATACCTATGAGGAATTGAAAC
GGACTAAATCCAGCACCCGGCCTTCTAGTAGATTTTG
809905
809906
GTTTTTACGATACCTATGAGGAATTGAAAC
AAAGTCAATATAGGTACTATAAGCATATAATATATT
809971
809972
GTTTTTACGATACCTATGAGGAATTGAAAC
GTTGATATGTCTATATAGACTTGAAGCATATAATATA
810038
810039
GTTTTTACGATACCTATGAGGAATTGAAAC
CCGGCGATGTTGATGACCCGCAAAAAGAGGGGTTCGA
810105
810106
GTTTTTACGATACCTATGAGGAATTGAAAC
AGAATACACGAGGGGGTTCTACCTTCCCTATTTTTTT
810172
810173
GTTTTTACGATACCTATGAGGAATTGAAAC
GGGATTTTGAGGGGGTGCTCTCATATGAGAGACTCC
810238
810239
GTTTTTACGATACCTATGAGGAATTGAAAC
AGTTTAATGCTGATAACCCATATACAAAAACGCTGA
810304
810305
GTTTTTACGATACCTATGAGGAATTGAAAC
AGACTTCCTTGTCCTGCTTAGGCAGGCAGAAGAAGT
810370
810371
GTTTTTACGATACCTATGAGGAATTGAAAC
GACGATAAGAAAAACTTATAAATATAAACAAAAAAA
810436
810437
GTTTTTACGATACCTATGAGGAATTGAAAC
CGCAAGTGAACTCCCTGAAAAATATCTAAGGGGGTTCC
810504
810505
GTTTTTACGATACCTATGAGGAATTGAAAC
TGGGATGGTCTGGGTCCAGCCCACACCAATCCCAGTAAC
810573
810574
GTTTTTACGATACCTATGAGGAATTGAAAC
ATACTGTTATAAAGCGCTATTCACAATTACAAAGCGA
810640
810641
GTTTTTACGATACCTATGAGGAATTGAAAC
TCATTTGCGCTCCGACGAAAGTCTTTTCATCGACGAAAACCCCC
810714
810715
GTTTTTACGATACCTATGAGGAATTGAAAC
AACAATGTTGTAGGATAAGGAATTGTTCCATCCAA
810779
810780
GTTTTTACGATACCTATGAGGAATTGAAAC
TGTTTTTTTTAAATACGAGCGTTTTTTAAGCAATTAG
810846
810847
GTTTTTACGATACCTATGAGGAATTGAAAC
GCACTTTTCAAAGAACTTTTAATTATCAATACCA
810910
810911
GTTTTTACGATACCTATGAGGAATTGAAAC
AAGATTTTCAGGGAGCTTTTTACGCAAGTGAACTCCC
810977
810978
GTTTTTACGATACCTATGAGGAATTGAAAC
ATAATAGATGGTTCGTGCATTTTCCCGTCCTCTAA
811042
811043
GTTTTTACGATACCTATGAGGAATTGAAAC
CAAAGAGGGAGTACAGGCAAATCCTCGCCCTCTTGA
811108
811109
GTTTTTACGATACCTATGAGGAATTGAAAC
TGTCTAAGCTAAGAGTAAAATCTAAACTAGCATTAG
811174
811175
GTTTTTACGATACCTATGAGGAATTGAAAC
CGTTTCCAATAGTATTTGTTCCTGCAGGTAGTGGTTGA
811242
811243
GTTTTTACGATACCTATGAGGAATTGAAAC
TTGCAGGCGATGCACAATCAGGCATTTATAAGTCAGG
811309
811310
GTTTTTACGATACCTATGAGGAATTGAAAC
CATATATACTACCATAAATATGAGTATATATAAACA
811375
811376
GTTTTTACGATACCTATGAGGAATTGAAAC
AGTAGAAAGCCATTTGATATAGGGGGGTCAATGTTTG
811442
811443
GTTTTTACGATACCTATGAGGAATTGAAAC
GCTTTACAAAAAGAAACAGACCAAACCAATTTAGC
811507
811508
GTTTTTACGATACCTATGAGGAATTGAAAC
AACTCTTCTTCATCCAGGAATTGGCCCTTTTTGAGCCAA
811576
811577
GTTTTTACGATACCTATGAGGAATTGAAAC
CTACAATGTTTTTTGCTGCTAATCAAATGCCTTATGCAT
811645
811646
GTTTTTACGATACCTATGAGGAATTGAAAC
ATAACAGCCCTAATACATTAGACATCTACAACGATAT
811712
811713
GTTTTTACGATACCTATGAGGAATTGAAAC
TATTGATATCCTAACTGAGCAAAAATATTTTTAA
811776
811777
GTTTTTACGATACCTATGAGGAATTGAAAC
TATTGCTTTTAGGGTTGTTTTTTTGTTTTTTGTTTTGT
811844
811845
GTTTTTACGATACCTATGAGGAATTGAAAC
TCGTTCAAGATATATAGCCTAACAGATTATCTAAATGA
811912
811913
GTTTTTACGATACCTATGAGGAATTGAAAC
TATATTTTTTATTTTTTTTATTATTATTATATATA
811977
811978
GTTTTTACGATACCTATGAGGAATTGAAAC
TTTCAATCATGTCTCTTTGAACGTTGCCACCTAA
812041
812042
GTTTTTACGATACCTATGAGGAATTGAAAC
AGATTAAAGTTTGTAAAGGAAACGTATACAAACAAA
812107
812108
GTTTTTACGATACCTATGAGGAATTGAAAC
AAGGAAAGATATGGCATTGATGTACATACTATAAGA
812173
812174
GTTTTTACGATACCTATGAGGAATTGAAAC
TTTTCAGATACATCAATACCATATAACATAATTTATA
812240
812241
GTTTTTACGATACCTATGAGGAATTGAAAC
CTAAAATGGGCATGGTTTTTGAGCCTTGTTTACCACC
812307
812308
GTTTTTACGATACCTATGAGGAATTGAAAC
TGGGATTGTTACAGAAGTAGAAGTAAGAGGGGATGA
812373
812374
GTTTTTACGATACCTATGAGGAATTGAAAC
TGTAATTGTTTAGTGCTTGTTCGTTTTCAATTAATTTTGA
812443
812444
GTTTTTACGATACCTATGAGGAATTGAAAC
AAGAACCTGTCTTTTTCTGTTGGTTCTTGTTCTTTTTCT
812512
812513
GTTTTTACGATACCTATGAGGAATTGAAAC
ACACTTCTTTACCATCCACTAGGATGGCAAGTTGC
812577
812578
GTTTTTACGATACCTATGAGGAATTGAAAC
CATTTCCAGCGATACCAAGCCAATTGTTCAGGGGTAATAC
812647
812648
GTTTTTACGATACCTATGAGGAATTGAAAC
812677
Left flanking sequence : Till position 807036 (length
bp)
GAATTTCTTTTAAAATAAAAGCATAAATATTCAGCTTTTTTATTATTTTAAGTTTGGAACTTCATGTTTA
ATATGCTAAAATAGTAAGTTAAGTCTAGTG
Right flanking sequence : From position 812677 (length
bp)
TTTGGTGTATTTGATTCTGTATTTATGGTTGTTTTTGGTTTTTATGTAAATTTTCATGTAAAATAGACCC
AGTTTTTTCATGAAAAATGACCCACCTTAA
Print the CRISPR sequence : From position
bp To position
bp