Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation


Other Tools


GPMS Links





NC_015562_12                                                                                                                 top


Strain : Methanotorris igneus Kol 5 RefSeq :NC_015562 (chromosome circular)
CRISPR id : NC_015562_12
DR consensus (37 bp) : GTTTGAATTACTCATCCATTAAAACAAGGATGGAAACNumber of repetitions :8
Begin Position : 1182094 End Position : 1182647

1182094GTTTGAATACTCAGTCCATTAAAACAAGGATGGAAACACTAAGCAAAATAAAGAGTTTATGAAGTTACTACAAGAAA 1182170
1182171GTTTGAATACTCAGTCCATTAAAACAAGGATGGAAACATTACAATAACATCTTCATCATCAACTAAAACATACCTTCTAA 1182250
1182251GTTTGAATACTCAGTCCATTAAAACAAGGATGGAAACCGGTTGGCATGATGTTGAGTATTTAGTGGCAAC 1182320
1182321GTTTGAATTACTCATCCATTAAAACAAGGATGGAAACTTTCTATTATTATTGTTTTGTAATCATGTTCAA 1182390
1182391GTTTGAATTACTCATCCATTAAAACAAGGATGGAAACCGTGGTCTAAATCTTCTATGTGTTATTCTTCTATAGT 1182464
1182465GTTTGAATTACTCATCCATTAAAACAAGGATGGAAACTAATAACCTCAGCCTGTCCCTTTGTAAAACCAACA 1182536
1182537GTTTGAATTGCTCATCCATTAAAACAAGGATGGAAACATTTTGACCGGGCATACTCCAATAACAATTATATCTG 1182610
1182611GTTTGAATATCTCATCCATTAAAACAAGGATTGAAAC1182647
Left flanking sequence : Till position 1182094 (length bp)
TTATTACTATTATTTATAGTATTCGTATTTTTCGACAACCTCCTAAAAAAAGAAACATTTATATAGGAGT
TCGGGCATAAAATAAGGACAGAAGTTAAGG
Right flanking sequence : From position 1182647 (length bp)
AAAATAAGGATTCAACACACTAAAATTTTACAACCCAAAATCCATTAATTTAAATTAATAAATAATAATT
AAGATGAAAAAGTAATAAATTTACTTTTTT

Print the CRISPR sequence : From position bp To position bp