CRISPR details
Home
About CRISPRs
News
FAQs
Help
Contact Us
Examples
IGM
Navigation
Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison
Other Tools
CRISPRcompar
CRISPRtionary
CRISPRfinder
GPMS Links
GPMS Team
Tandem Repeats DB
MLVA Web Service
CRISPRs details
NC_015562_16
Flanking alignement tool
Page manual
  
Home Page
NC_015562_16                                                                                                                 
top
Strain :
Methanotorris igneus Kol 5
RefSeq :
NC_015562 (chromosome circular)
CRISPR id :
NC_015562_16
DR consensus (37 bp) :
GTTTCCATCCTTGTTTTAATGGATGAGTAATTCAAAC
Number of repetitions :
7
Begin Position :
1280412
End Position :
1280888
1280412
GTTTCCATCCTTGTTTTAATGGATGAGGTATTCAAAC
TTGCTGGGTTTGGGATGTTAATTTATTTGGTAAAA
1280483
1280484
GTTTCCATCCTTGTTTTAATGGATGAGTAATTCAAAC
TTGGCGGAGGACAAGGAACGCTTAAAATCATGGATT
1280556
1280557
GTTTCCATCCTTGTTTTAATGGATGAGTAATTCAAAC
CCCTTTTTTCCTCGGTATCCAATAACACAGCCATTTTG
1280631
1280632
GTTTCCATCCTTGTTTTAATGGATGAGTAATTCAAAC
TGTTGAAAATATTAAATCACAAATATCCGTTTTAT
1280703
1280704
GTTTCCATCCTTGTTTTAATGGATGAGTAATTCAAAC
TAACATAATCAATATATTATATTCACATTATCCCACA
1280777
1280778
GTTTCCATCCTTGTTTTAATGGATGAGTAATTCAAAC
AAAACATTAGTCAATCTGATATTCAATTTATATATCA
1280851
1280852
GTTTCCATCCTTGTTTTAATGGATGAGTAATTCAAAC
1280888
Left flanking sequence : Till position 1280412 (length
bp)
AAGATGATGTTTTATTCTCTTAACTCCAATTCCTATCATACATTTGAATATTTATGGATGCAAATTTTTT
AATGATGTAGTTTTTTAATAATAAAATCAT
Right flanking sequence : From position 1280888 (length
bp)
CCTATAACTTCATCCTTATTTTATACCTAAACTCCTATATAAATCTTTCTTTTTCAACCCTATTTTTCTT
ACTGCCCAATTATTGAAACCTTTATAAAAG
Print the CRISPR sequence : From position
bp To position
bp