Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_015562_22                                                                                                                 top


Strain : Methanotorris igneus Kol 5 RefSeq :NC_015562 (chromosome circular)
CRISPR id : NC_015562_22
DR consensus (31 bp) : GTTTCCATCCCCCTAAGGGTCTGATTTTAACNumber of repetitions :17
Begin Position : 1491593 End Position : 1492727

1491593ATTTCCATCCCCCTATGGGTCTGATTTTAACGTTGTAGCACCACAACAACAAGGTGGACAGCAACAACAAGACCCGA 1491669
1491670GTTTCCATCCCCCTATGGGTCTGATTTTAACTAAACAGAATCGGAGCAAACATAACAGCAATGCTTGAG 1491738
1491739GTTTCCATCCCCCTAAGGGTCTGATTTTAACAGGATGATGTTAAGAAAATCGTAGAGTTTCTTTCTTCATAA 1491810
1491811GTTTCCATCCCCCTAAGGGTCTGATTTTAACTCAAGTTCAGCAATGCACTTAAGAAGTAAAATATCA 1491877
1491878GTTTCCATCCCCCTAAGGGTCTGATTTTAACTGTGAATGCGATGATGGATTAACAGTTAAAGCATT 1491943
1491944GTTTCCATCCCCCTAAGGGTCTGATTTTAACTACATGAATGATGCTAAAAGGGTTGTTATAGTTGTTGAGAAGG 1492017
1492018GTTTCCATCCCCCTAAGGGTCTGATTTTAACGACAATGAAGAGCCAAACCCACTAAACAATAAACTTA 1492085
1492086GTTTCCATCCCCCTAAGGGTCTGATTTTAACACTTTCCAAACGCATAAGTCCAAATACTGCTAAAAAT 1492153
1492154GTTTCCATCCCCCTAAGGGTCTGATTTTAACGTAACTTTGCAAGTAACTCAAGAATTTCCAGTAACTT 1492221
1492222GTTTCCATCCCCCTAAGGGTCTGATTTTAACCTCATTTATTATGTGCCACACTTAAAAAAAGATTAT 1492288
1492289GTTTCCATCCCCCTAAGGGTCTGATTTTAACAATTTGAAAATAAGCAGTTAAACAAATCTCTCAATA 1492355
1492356GTTTCCATCCCCCTAAGGGTCTGATTTTAACATAACTCCTCCTAATCCGCTGTCTAACATATTCGTTAAAAG 1492427
1492428GTTTCCATCCCCCTAAGGGTCTGATTTTAACAATTTGTTACAACCAAACAACTTGCAGAAGAGTG 1492492
1492493GTTTCCATCCCCCTAAGGGTCTGATTTTAACTATAGCCAGAAAATACCCATATTTCAAAACTCTACA 1492559
1492560GTTTCCATCCCCCTAAGGGTCTGATTTTAACGTATTATTTGATGATTCCGATGAGTATGCTAAAAAAGC 1492628
1492629GTTTCCATCCCCCTAAGGGTCTGATTTTAACTCGTACAGATTACCGTCTGAAATTTTGAAATTCTCAG 1492696
1492697GTTTCCATCCCCCTAAGGGTCTGATTTTAAC1492727
Left flanking sequence : Till position 1491593 (length bp)
GCTACGCTCGGCAGTGCCTCTTTTAGGTAAAAATAAAATTTCCATCCTAAGGGTGATTTTAACTTGATTT
TGTTTTATTTTTGATATTGATTTTATCGCT
Right flanking sequence : From position 1492727 (length bp)
AGGACAATATTTTGCTCTTTTTCCTATATAAAGGTTTCTATTTGCTTCTTTTCGAAACCTTAATTTTCAA
AGGGGTATTAACAGTGTTCATTTATATACC
Print the CRISPR sequence : From position bp To position bp