Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_015563_2                                                                                                                 top


Strain : Delftia sp. Cs1-4 RefSeq :NC_015563 (chromosome circular)
CRISPR id : NC_015563_2
DR consensus (32 bp) : GTTTCAATCCACGCGCCCGCACGGGGCGCGACNumber of repetitions :35
Begin Position : 4895219 End Position : 4897497

4895219GTTTCAATCCACATGCCCGCATGGGGCGCGACGGAGGCGGGAGAGTCGCGGGCAGCTTTGGCGA 4895282
4895283GTTTCAATCCACGCGCCCGCACGGGGCGCGACCTGATTACAAACAGGCCCATAGCACCCCCTCTTTG 4895349
4895350GTTTCAATCCACGCGCCCGCACGGGGCGCGACCGCCGCCATCGGTGCGCGTGCGCTCGATGGAGAA 4895415
4895416GTTTCAATCCACGCGCCCGCACGGGGCGCGACATGCGCAGCTGGTTGCCCGGCACCCAGCCGCTGCC 4895482
4895483GTTTCAATCCACGCGCCCGCACGGGGCGCGACCTGGTTTCGCGGGCCAGCACGCCGCTGCCCTGGTA 4895549
4895550GTTTCAATCCACGCGCCCGCACGGGGCGCGACTCGATCAGCACGGCCTTGCCCAGGTCTTCGATGAC 4895616
4895617GTTTCAATCCACGCGCCCGCACGGGGCGCGACTGACGATGATCGACGTGGCAGACCTGCGTTTCCT 4895682
4895683GTTTCAATCCACGCGCCCGCACGGGGCGCGACTCCTGCTGTGACGCCTAGCATCGGCTATCCAGCCA 4895749
4895750GTTTCAATCCACGCGCCCGCACGGGGCGCGACGTCCGCGGTCACGGTCTTGACGCGCGCAGCACG 4895814
4895815GTTTCAATCCACGCGCCCGCACGGGGCGCGACCGAACTGGTGCATGACGCCAGAACGATGCTGAA 4895879
4895880GTTTCAATCCACGCGCCCGCACGGGGCGCGACCCGAAGCATTGCCGGTGAGGGCAATGGAGCGCAC 4895945
4895946GTTTCAATCCACGCGCCCGCACGGGGCGCGACGATTGCCCCCTGTGCCAACTGGCCGCCCAAGTGCA 4896012
4896013GTTTCAATCCACGCGCCCGCACGGGGCGCGACGAACCAGCCCAGGTCCACCGGCTTACCCATCTC 4896077
4896078GTTTCAATCCACGCGCCCGCACGGGGCGCGACCTTGACGAGCCAGCCCTCGCCGTCAATCTCAGGCTT 4896145
4896146GTTTCAATCCACGCGCCCGCACGGGGCGCGACCCAGCTTGCAAATGTCGCAGGCGATATCGACGTT 4896211
4896212GTTTCAATCCACGCGCCCGCACGGGGCGCGACGTCGCCCTGCGTCGGGATGTGCGGGTCAGGCCG 4896276
4896277GTTTCAATCCACGCGCCCGCACGGGGCGCGACTGCAGCACCTGCCAATCTTCTGCTTCGCTGGAGTG 4896343
4896344GTTTCAATCCACGCGCCCGCACGGGGCGCGACCGCATACGTTCTCCTAGCGTATTTTTGTGGAAAT 4896409
4896410GTTTCAATCCACGCGCCCGCACGGGGCGCGACTCCTCTGCAACGTCATCAGCGGTCCCTTTAGGAA 4896475
4896476GTTTCAATCCACGCGCCCGCACGGGGCGCGACTCGCTCTGGTGCCGATGCGCCTGACGCGGGCCAT 4896541
4896542GTTTCAATCCACGCGCCCGCACGGGGCGCGACACAGCAGACGCTACAGCGAGTCAGGCAAGCGGTG 4896607
4896608GTTTCAATCCACGCGCCCGCACGGGGCGCGACGGCCGGGGTAGGTCGTTCTATTTCGGCTCCAAA 4896672
4896673GTTTCAATCCACGCGCCCGCACGGGGCGCGACGGCTGTGGAGGCGCTTCTGTTTGAGCGTAGACCT 4896738
4896739GTTTCAATCCACGCGCCCGCACGGGGCGCGACAAGCGGCGACTCCGTAGATCAGTGCCTCATGGGC 4896804
4896805GTTTCAATCCACGCGCCCGCACGGGGCGCGACCTGTGCACGATCCTGCCACAAGGGCCGCGCACCAC 4896871
4896872GTTTCAATCCACGCGCCCGCACGGGGCGCGACGCTGCGCATCACGGTCGTGCTGCTCAGCCAGTT 4896936
4896937GTTTCAATCCACGCGCCCGCACGGGGCGCGACTTGGCATCCGTCACCCAGTCCTCGTACATCGGGC 4897002
4897003GTTTCAATCCACGCGCCCGCACGGGGCGCGACCCGTCACCTGGTCATAAGCGGGTGCCGTATGGG 4897067
4897068GTTTCAATCCACGCGCCCGCACGGGGCGCGACCAGGCTGGCAGGGCATTTCGGGCTGTGTGCAGAT 4897133
4897134GTTTCAATCCACGCGCCCGCACGGGGCGCGACAAGTTCGGCACGTCCGAAGAGTTCAAGAAGTGGG 4897199
4897200GTTTCAATCCACGCGCCCGCACGGGGCGCGACCTGATGAGGCCATGCACGCTCATGGCCGGCTGATC 4897266
4897267GTTTCAATCCACGCGCCCGCACGGGGCGCGACTTGGCATCCGTCACCCAGTCCTCGTACATCGGGC 4897332
4897333GTTTCAATCCACGCGCCCGCACGGGGCGCGACGTGCGCTACGACGCACCAGGGTGTTCGACCTGGTT 4897399
4897400GTTTCAATCCACGCGCCCGCACGGGGCGCGACGACGGGCATGCGTACAGCCCTCACCCTTGAGCGT 4897465
4897466GTTTCAATCCACGCGCCCGCACGGGGCGCGAC4897497
Left flanking sequence : Till position 4895219 (length bp)
TTCCCAAACCCTGCACATCCGGTAGGACAGCGCCTTGCCGACATGCAGGCATCGGGCTGCCAGCGATTGC
ACGAACCGTCATTTCGCGCTTGATGGCCAT
Right flanking sequence : From position 4897497 (length bp)
GGCATGCTTATAACCCAGCCGTACCACTGCAAAAAAAGCTTCGCCATCGCGAACCTGCGCGCTCTGTCCC
GAAAAAACGGCAAGGACCACGACAGACGCA
Print the CRISPR sequence : From position bp To position bp