Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_015567_1                                                                                                                 top


Strain : Serratia sp. AS9 RefSeq :NC_015567 (chromosome circular)
CRISPR id : NC_015567_1
DR consensus (25 bp) : CACTGCCGTACAGGCAGCTTAGAAANumber of repetitions :7
Begin Position : 501287 End Position : 501672

501287CACTGCCGTATAGGCAGCTTAGAAAAGGTGCATTTTGTTGCTGCCATCTGAGTTCTGGTG 501346
501347CACTGCCGTATAGGCAGCTTAGAAAGTCCACGATCTTTTTGTCGTCCGTGTTTACTGGTG 501406
501407CACTGCCGTATAGGCGGCTTAGAAAGATGCGCTGGCTGTGGAGAATGCGGTGCTGAAGTG 501466
501467CACTGCCGTACAGGCAGCTTAGAAAGTACAGTTATTGACAGAACTCCGAGAGGGCGCGTT 501526
501527CACTGCCGTACAGGCAGCTTAGAAACGGCAGCGTTGCAACCAGTACGCGCCCAGTGAAGTT 501587
501588CACTGCCGTACAGGCAGCTTAGAAAGCTGGGCATGGCTGCAGAAATGGAGTCGATGTGTT 501647
501648CACTACCGTAAAGGCCGTTTCAAAA501672
Left flanking sequence : Till position 501287 (length bp)
TTTTAAACATGCTGAATGGGCAGGCTGAAAAAAGCCTTTTTGGGGGAATCCTGGTGTTACTCTTCAATAA
TCAGCTGATTAGCGCTAATCTTCAACGGTG
Right flanking sequence : From position 501672 (length bp)
CCGATGGAAATGTAATTGCATTTTGCTATTTTTCATTAAGTTTAACGTATTTATACTGTGGCTTGAAAAG
ATCAAGGTTACGACAGCAATGCATTAAATT
Print the CRISPR sequence : From position bp To position bp