Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_015577_6                                                                                                                 top


Strain : Treponema azotonutricium ZAS-9 RefSeq :NC_015577 (chromosome circular)
CRISPR id : NC_015577_6
DR consensus (35 bp) : GTCTGAACAAATGACCTGATTAAAGGGATTAAGACNumber of repetitions :3
Begin Position : 3386207 End Position : 3386385

3386207ATCTGAACAAATGACCTGATTAAAGGGATTAAGACGTGCCAGTGCAGTTCATTAAGTTAGTGCAGTTATAGA 3386278
3386279GTCTGAACAAATGACCTGATTAAAGGGATTAAGACGCTTCCGGTACTGTTCCGAACATTGCCATCTTCATTT 3386350
3386351GTCTGAACAAATGACCTGATTAAAGGGATTAAGAC3386385
Left flanking sequence : Till position 3386207 (length bp)
GAAATCGCAAACCTCGGATTTGCTTAAAAACCCCCAAAAATGGGGTAGGTTTGCGAAAGTTATAATTGCT
TACAGCACAAGGAATTATGAAGGGTAACGT
Right flanking sequence : From position 3386385 (length bp)
TAATTTCCTTTCTGTTACAGTTGGAAAAAGATTACTGTGCTAAAAAGCCAAAAAAATTTACAGAAAAGTT
ATTTGTTAAGTGTTAAGTTTCTTATTTTTT
Print the CRISPR sequence : From position bp To position bp