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CRISPRs details
NC_015680_2
Flanking alignement tool
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NC_015680_2                                                                                                                 
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Strain :
Pyrococcus yayanosii CH1
RefSeq :
NC_015680 (chromosome circular)
CRISPR id :
NC_015680_2
DR consensus (30 bp) :
CTTTCAATTCTCTTTGAGTCTTATTGGAAC
Number of repetitions :
15
Begin Position :
41222
End Position :
42207
41222
CTTTCAATTCTCTTTGAGTCTTATTGGAAC
CCTCAACAACAAGCACAAACTATTCGTCGTCTACAATT
41289
41290
CTTTCAATTCTCTTTGAGTCTTATTGGAAC
GCGCAAATAGTTCTCCCCACAGAGCTCGAGCTCTCCACGT
41359
41360
CTTTCAATTCTCTTTGAGTCTTATTGGAAC
GAGGGCGGGGCTGGCGTGGAGGATGAACGCGGTCG
41424
41425
CTTTCAATTCTCTTTGAGTCTTATTGGAAC
AAAGGAAATAGTTAGTTTCTTTACGGAAGAACCAGAAG
41492
41493
CTTTCAATTCTCTTTGAGTCTTATTGGAAC
TTTGGTACGTAAGCGCGATGACGGCAAGTACGAGCTGATAGA
41564
41565
CTTTCAATTCTCTTTGAGTCTTATTGGAAC
GGTGATACTAGAGGACGAGGAGGAGTTATTCGAGCTTC
41632
41633
CTTTCAATTCTCTTTGAGTCTTATTGGAAC
AAATGTAAAAATGAGGGGGCTTCAGATCCACCCCACG
41699
41700
CTTTCAATTCTCTTTGAGTCTTATTGGAAC
TTCAACGTTTCTGGTTGTTATCTCGTCTGGAGCAGCC
41766
41767
CTTTCAATTCTCTTTGAGTCTTATTGGAAC
ACTCTCACACGGACACACACAAAATCCTGGTTACAT
41832
41833
CTTTCAATTCTCTTTGAGTCTTATTGGAAC
TCCAGCCTGTTGGCCTGGGTGAAGGAGGGGAAGAAGG
41899
41900
CTTTCAATTCTCTTTGAGTCTTATTGGAAC
CGTTGTCCCAATAGAGCACTACAACGAGAAGAAGAAGC
41967
41968
CTTTCAATTCTCTTTGAGTCTTATTGGAAC
AGCATCCATACGGAAGTTGCGTTAAGCTGTACTATGA
42034
42035
CTTTCAATTCTCTTTGAGTCTTATTGGAAC
CCGGCCGGGCCCAAATTTCCTTCAGCTCAGCCGTCCGGCTTTTGC
42109
42110
CTTTCAATTCTCTTTGAGTCTTATTGGAAC
TATCCATTGCCCCCCACCTTTTTTATGATAATTCTATC
42177
42178
CTTTCAATTCTCTTTGAGTCTTATTGGAAC
42207
Left flanking sequence : Till position 41222 (length
bp)
TCGTAATTTTGGATCTATCATCTCCCCTTATTTAGAAACCCCATTCAAGGAAATCCTGAAGCAAGAACAC
ATACATATATCCACGATTTTCCTTTATAAG
Right flanking sequence : From position 42207 (length
bp)
AGGTGGGTTTTTTGCTTGTTTTCTTCTATGCTTTTCTTGGGAGTCTTGGATTTTATAAATCTTTTGGCGA
GGGGGTCTTAACGAGGCCTTGAGAGGGCTT
Print the CRISPR sequence : From position
bp To position
bp