Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation


Other Tools


GPMS Links





NC_015680_4                                                                                                                 top


Strain : Pyrococcus yayanosii CH1 RefSeq :NC_015680 (chromosome circular)
CRISPR id : NC_015680_4
DR consensus (30 bp) : GTTCCAATAAGACTCAAAGAGAATTGAAAGNumber of repetitions :30
Begin Position : 693109 End Position : 695095

693109GTTCCAATAAGACTCAAAGAGAATTGAAAGAACTTAGTCGGCGATAGGTATGACATAGTTAAGAAA 693174
693175GTTCCAATAAGACTCAAAGAGAATTGAAAGCGGGGCCTGATGCGGGCGGGATCCGCCCCGCCGGCCT 693241
693242GTTCCAATAAGACTCAAAGAGAATTGAAAGCAAACAACTGCACCCACGACCGCGCCAGGAGGGCCGGCTAAG 693313
693314GTTCCAATAAGACTCAAAGAGAATTGAAAGTTCTAATAATCACGAGTACGACGTCTTCGTCGTCAT 693379
693380GTTCCAATAAGACTCAAAGAGAATTGAAAGTCGTTTTCTTCATTATTATCTATGTCATTACACCTAT 693446
693447GTTCCAATAAGACTCAAAGAGAATTGAAAGCGGGGCGCGAGCCGGCGGGAAATCCGCCCCCGCGGGG 693513
693514GTTCCAATAAGACTCAAAGAGAATTGAAAGCTGGATCTCTCTGAATTCTTCTGGATCACTAGTAACCT 693581
693582GTTCCAATAAGACTCAAAGAGAATTGAAAGGGATTTTCTGGAGTACTTTTGGAGTTCCTGGATCGT 693647
693648GTTCCAATAAGACTCAAAGAGAATTGAAAGCTCTGCCTTCACTTCCACCACCCCCAAGCCTTCTTC 693713
693714GTTCCAATAAGACTCAAAGAGAATTGAAAGGATGACGGCAACAACCTCGCCCGCCCTGTTCTTCGG 693779
693780GTTCCAATAAGACTCAAAGAGAATTGAAAGTGCTGGAATGTGGGGCGTCGGCGGTAGGATCAAGTGG 693846
693847GTTCCAATAAGACTCAAAGAGAATTGAAAGTTGACGAGATCATCGACGGTCTCGAGAAGGGGGAGGCT 693914
693915GTTCCAATAAGACTCAAAGAGAATTGAAAGCGGAACCAGGCGAGGAGGGCCTGCTTCTTTGGGCTCCACGCC 693986
693987GTTCCAATAAGACTCAAAGAGAATTGAAAGGGGGAGGCGAGAAGGCTAGGTTTCTTCATAGCATCAG 694053
694054GTTCCAATAAGACTCAAAGAGAATTGAAAGCCGCCCTCCCTCGTCCTCATCTCAACCGCCCCACTGC 694120
694121GTTCCAATAAGACTCAAAGAGAATTGAAAGTTGATAATCTCTGGATCCTCGAAGCCGGCCTTGAGCA 694187
694188GTTCCAATAAGACTCAAAGAGAATTGAAAGACTCTCTCCCAAAGTAACAACTGCCAGCGCTGGTCTCT 694255
694256GTTCCAATAAGACTCAAAGAGAATTGAAAGCATTCAAGGGAATTGGATTTACTGGCTTGTAGCGAA 694321
694322GTTCCAATAAGACTCAAAGAGAATTGAAAGCTGTAAAGAAAGTTGACAGTTTCTTGACCTCTTCCCAT 694389
694390GTTCCAATAAGACTCAAAGAGAATTGAAAGCCTTTTTAGCAGTTCATCTGCGAGCCGAAACAGAGCCT 694457
694458GTTCCAATAAGACTCAAAGAGAATTGAAAGGGCAAAAAAGCTTGGAGAAGCTAGGCCTTTACGGACTG 694525
694526GTTCCAATAAGACTCAAAGAGAATTGAAAGTATGGATACTGTAGGTACACTCGATACGTCAGCGCAA 694592
694593GTTCCAATAAGACTCAAAGAGAATTGAAAGGGAGCCCCAGAGGAGTGTTCCGGGCCCGGGGGAGTCCCC 694661
694662GTTCCAATAAGACTCAAAGAGAATTGAAAGCGTCGTCTTCGTAGATGTCTATTATCTCTACCTCC 694726
694727GTTCCAATAAGACTCAAAGAGAATTGAAAGTCACTTGTTCTAACTGCTGGTAAAGCTCTTTTAGTTGC 694794
694795GTTCCAATAAGACTCAAAGAGAATTGAAAGTTTCGGGGGTTCGGGGCCTGAGCCGGCGGGGAATCCG 694861
694862GTTCCAATAAGACTCAAAGAGAATTGAAAGTGATGTAGTTAGCGAGATCCTCCTGGAGTCCATTCCTAGG 694931
694932GTTCCAATAAGACTCAAAGAGAATTGAAAGGACCCCGGAATGCCTACGAATTCAGTTAACAACTCAA 694998
694999GTTCCAATAAGACTCAAAGAGAATTGAAAGGGAAAGGCTTCCACGTTGAGTTGCCCCGCTCGTCCCT 695065
695066GTTCCAATAAGACTCTAAGAGAATTGAAAG695095
Left flanking sequence : Till position 693109 (length bp)
AAGCCCTCTCAAGGCCTCGTTAAGACCCCCTCGCCAAAAGATTTATAAAATCCAAGACTCCCAAGAAAAG
CATAGAAGAAAACAAGCAAAAAACCCACCT
Right flanking sequence : From position 695095 (length bp)
TTTACCCTAATTGCGGCCGTGATCATTGCAATCCTCTGATTGTTTTTGTTATTATTTTTGTTACTCGTTG
GTTTGGTTGGGTTATTATTTTGGCTATCCG

Print the CRISPR sequence : From position bp To position bp